Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00713 ATGGCTCTCAGTCTCACGCATCAAGTTCAAGCTCCCTCCTCCTCCTCTTTCCCCACCCCTCGCCGCCCTCTACCCGCCCCTCGGACCCTCCCTTTCCGCCGCCTCGCCGTGCGCGCCTCTGTCACCGCGGCCCCTGCGGCGGCGCCCACGGGGAGGGAGTGCAGGGTGAAGTCCCTGAAGGCGCGGCAGATCGTGGATCTGCTGACCGACCAGCTTTTCCGATCGGCGGTGCCCAGCGGCGCGTCGACGGGGATTTACGAGGCTTTGGAGCTCAGGGATGGGGACAAGAGTGTTTACGGCGGGAAGGGCGTTCTTAACGCCGTTAGGAACATCAACGAGGTGTTGGCCCCGAAACTCGTTGGCGTTGACGTTAGGAATCAAGCTGATGTGGATGCTATTATGCTAGAAATTGATGGAACTCCTAACAAATCAAAACTAGGGGCTAATGCAATATTGGGAGTTTCACTGAGTGTGTGTAGAGCTGGTGCAGGAGCAAAGGGAGTGCCCTTGTACAAGCACATTCAAGAGATTTCAGGAACAAAGGAACTAGTTATGCCCGTTCCAGCTTTTAATGTTATAAATGGGGGCAGTCATGCTGGGAATAATCTTGCTATGCAAGAATTTATGATACTACCTGTGGGAGCAACATCATTTGCTGAGGCACTCCGCATGGGCAGTGAAGTTTACCATGTATTAAAGGGCATAATCAAGGCAAAATATGGACAAGATGCATGTAATGTTGGAGATGAAGGAGGATTTGCTCCCAGTGTCCAGGATAACAGGGAGGGGCTGGTTTTACTCATCGATGCCATTGAGAAGGCTGGTTATACTGGCAAGATTAAAATAGGTATGGATGTTGCAGCTTCAGAGTTTTACACTAAGGATGGGACGTATGATTTAAACTTCAAGAAACAGCCAAATGATGGAACTCATGTTCACTCTGCTCAGAGTCTTGGTCAACTTTATGTAGATTTTGTAAAAGAATTCCCCATTGTGTCAATTGAGGATCCATTTGATCAAGATGATTGGGGTTCATGGGCTTCACTGCTCTCTTCAGTTGATATTCAACTTGTAGGAGATGATTTGTTAGTTACAAATCCAAAGAGAATAGCTGAGGCCATCCAAAAGAAGGCTTGCAATGGTTTGCTTCTAAAGGTTAACCAGATTGGTACAGTGACGGAATCTATTCAGGCTGCACTTGACTCAAAGGCTGCAGGTTGGGGTGTCATGGTTAGTCATCGGAGTGGTGAGACTGAGGATAACTTCATTGCTGATCTCTCTGTTGGCTTGGCCAGTGGACAGATAAAGACCGGTGCTCCTTGCCGAAGTGAACGATTAGCAAAGTATAACCAGCTTCTTCGGATTGAAGAGGAACTTGGAAGTGTGCGATATGCTGGTGAAGCTTTCAGATCACCTTAG 1419 0.4877 MALSLTHQVQAPSSSSFPTPRRPLPAPRTLPFRRLAVRASVTAAPAAAPTGRECRVKSLKARQIVDLLTDQLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVRNINEVLAPKLVGVDVRNQADVDAIMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGVPLYKHIQEISGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHVLKGIIKAKYGQDACNVGDEGGFAPSVQDNREGLVLLIDAIEKAGYTGKIKIGMDVAASEFYTKDGTYDLNFKKQPNDGTHVHSAQSLGQLYVDFVKEFPIVSIEDPFDQDDWGSWASLLSSVDIQLVGDDLLVTNPKRIAEAIQKKACNGLLLKVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGSVRYAGEAFRSP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00713 472 Pfam Enolase, C-terminal TIM barrel domain 183 470 IPR020810 -
Cca03g00713 472 Gene3D - 51 167 IPR029017 -
Cca03g00713 472 MobiDBLite consensus disorder prediction 1 25 - -
Cca03g00713 472 PIRSF Enolase 61 471 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 Pfam Enolase, N-terminal domain 65 174 IPR020811 -
Cca03g00713 472 CDD enolase 58 458 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 SMART Enolase_C_3 182 472 IPR020810 -
Cca03g00713 472 Gene3D - 168 472 IPR036849 -
Cca03g00713 472 SUPERFAMILY Enolase C-terminal domain-like 182 462 IPR036849 -
Cca03g00713 472 SMART Enolase_N_3 56 174 IPR020811 -
Cca03g00713 472 SFLD enolase 65 459 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PANTHER ENOLASE 1, CHLOROPLASTIC 30 472 - -
Cca03g00713 472 TIGRFAM eno: phosphopyruvate hydratase 65 468 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 MobiDBLite consensus disorder prediction 1 17 - -
Cca03g00713 472 SFLD Enolase 65 459 - -
Cca03g00713 472 ProSitePatterns Enolase signature. 382 395 IPR020809 -
Cca03g00713 472 SUPERFAMILY Enolase N-terminal domain-like 56 180 IPR029017 -
Cca03g00713 472 Hamap Enolase [eno]. 44 459 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PRINTS Enolase signature 147 163 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PRINTS Enolase signature 204 217 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PRINTS Enolase signature 77 91 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PRINTS Enolase signature 382 396 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PRINTS Enolase signature 411 428 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PRINTS Enolase signature 359 370 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Cca03g00713 472 PANTHER ENOLASE 30 472 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00713 Cca-Chr3 13771240 13775742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00713 K01689 - gmx:100787451 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00713 03 13771240 13775742 Cca03g00713 03 13771240 13775742 ECH