Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00712 ATGTCTTCAAAATTACGACAATCATTATCTGATAAGCTGAGGGTAGTTATAGAGAACAAGGACATGGTTTTCTCTTCATTTCGAAGATACCTTAGTATGAAGGGTGAAAGCTCCAAGGTTCAGACTTTATATGACCACTGCAAAACCATCTTATCGCCCACTGGAGCACCCCCTCCCTCTTTCCAAGCTTTGCAGAAGCTCTCTTCAATTCTGGACAGTATTCAACCTGCTGATGTTGGCCTTAAAGAGGAAACTGCAGACGATGATCGAGGGCATGGGTTTTTTGGTGCTAACCTACTTAATAGAGTGGATCGATGGGCTCAACCAATAACATATGTGGACATTCATGAATGTGATAGTTTTACGATGTGTATATTCTGTTTCCCAACTTCTTCGGTTATTCCACTCCATGACCATCCTGGGATGACTGTATTTAGCAAACTTCTCTATGGCTCTTTGCATGTAAAAGCTTATGACTGGGTTGAGCCTCCCTGCATTGTTGAAAGCAAAGGACCAGGATTTTCTCAAGTAAGACTAGCAAAGTTAGCAGTTGATAAGGTCTTGAATGCACCGTGTGAGACATCGGTTTTATATCCCAAACATGGTGGAAATCTGCACTGTTTCACAGCAGTAACACCTTGTGCTATGCTAGATGTTCTCACGCCTCCTTACAGCGAAGATGAAGGAAGGAAGTGTACATTCTATCATGATTATCCTTATTCAGCATTCTGA 732 0.4194 MSSKLRQSLSDKLRVVIENKDMVFSSFRRYLSMKGESSKVQTLYDHCKTILSPTGAPPPSFQALQKLSSILDSIQPADVGLKEETADDDRGHGFFGANLLNRVDRWAQPITYVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIVESKGPGFSQVRLAKLAVDKVLNAPCETSVLYPKHGGNLHCFTAVTPCAMLDVLTPPYSEDEGRKCTFYHDYPYSAF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00712 243 PANTHER 2-AMINOETHANETHIOL DIOXYGENASE 34 243 - -
Cca03g00712 243 SUPERFAMILY RmlC-like cupins 38 238 IPR011051 -
Cca03g00712 243 Pfam PCO_ADO 70 242 IPR012864 GO:0016702
Cca03g00712 243 Gene3D Jelly Rolls 37 241 IPR014710 -
Cca03g00712 243 PANTHER UNCHARACTERIZED 34 243 IPR012864 GO:0016702
Cca03g00712 243 CDD cupin_ADO 119 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00712 Cca-Chr3 13766612 13770517 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00712 K23953 - gmx:100807889 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00712 03 13766612 13770517 Cca03g00712 03 13766612 13770517 ECH