Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00706 ATGAGCAATCCTCATGCAGATGAAAGAGAGAAGTGTCAAAAGAAGAGAAAATCCACCATATGTGAGTCCTCTAGCCTTAGGACACCAAGGAGAAGATATTGCAACAACAAAAATGAAGAAGAGATGAACACGGAAGTTTCAACAACATTGAAGTTTTACGATGACCCATGGAAGATCAAGAAGACAATAACTGATAGTGATTTGGTAATCTTAAGTAGACTCTTGTTGGCTGCATATTTGGTCAAAAAACAAATTCTTCCTATATTGGGTGTAGATCATGTAAGAGTTGCAGAAACCGAAGAAGGGTCCCCAGTTAGTGTTTGGGACATGGACACAAAATCCATGCACCAACTCATTCTAAAGCGATGGTCTTCATCCAAGAGCTACTTTCTTATTGGAAAATGGAACCAAGATTTCGTGAGAAGAAGAGATCTAAAGAAAGGTGATGAGATTGGTTTTCATTGGGATCCATATAATTATGTTTTCAATTTTTGTGTTCTTAAACGAGTTATTTCAGAGAATTAA 525 0.3695 MSNPHADEREKCQKKRKSTICESSSLRTPRRRYCNNKNEEEMNTEVSTTLKFYDDPWKIKKTITDSDLVILSRLLLAAYLVKKQILPILGVDHVRVAETEEGSPVSVWDMDTKSMHQLILKRWSSSKSYFLIGKWNQDFVRRRDLKKGDEIGFHWDPYNYVFNFCVLKRVISEN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00706 174 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 169 - -
Cca03g00706 174 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 169 - -
Cca03g00706 174 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g00706 174 SUPERFAMILY DNA-binding pseudobarrel domain 55 166 IPR015300 -
Cca03g00706 174 CDD B3_DNA 57 168 IPR003340 GO:0003677
Cca03g00706 174 Gene3D - 56 169 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00706 Cca-Chr3 13395488 13396012 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00706 - - gmx:102670334 299.286