Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00696 ATGACAATAGTTAGCGGCAAGGAGAGGCCCGTGCAGAAGCACGTGCTGGTGATACCGTTCCCAGCACAGGGTCACATGATCCCTCTCCTCGACCTAACCCGCAAGCTGGCCTCCAACCCTTCCCTCGCCATCACCGTCGTGAccacccccgccaaccgccctctcctctccgcgctcctctcctcccacccttctatccacaccctcctcctccccttcccgcaccacccctccgtcccccCAGGCATAGAAAACGTCAAGGACATGCCCCACCTCATCCGCGCCATAAccctctccctctcccacctccaccgccccctcctccgctggctccgctcccacccctcccctcccaccctcatcatctccGACATGTTCCTCGGATGGACCCAAAACCTCGGACTCCCCAGACTCGTCTTTTCCCCCTCCGCCGCCTTCACCTTCTCCACCATGTGCTTCCTCTGGATACACCTCCCCAAGCCCACCAACCACCCATCCGACGTCGTTTCCTACCACACGCTCCCCAACTCCCCCGAGTTCCCCTGGTGCCAGGTCTCCCCTATGTTCCGAAGCTACACCGCAGGGGACGAGGATTCCGAGAATCTAAAAGAGTGGTTCCTCGGAAACCTCGCAAGCTGGGGACTCCTTGTCAACTCCTTCGCCGACCTCGAGAGGCCTTATTTTGACTTTCTCACAAAGGAATTGGGCCACGATCGAGTGTGGGCGGTCGGACCGTTGCTCCCTGAGGACGAGTCCTCTGTGAAGGACAGAGGCGGGACGAGCTCCGTGTCGGTGAACGACGTCGTTTCGTGGCTGGACAAAATGGAGGAGCGTAAGGTGGTGTATATCTGCTTCGGGAGCCAGAGTATCCTGAGTGGGGATCAGAAAGAGGCGATTAAGTCGGGGTTGGTGAAGAGCGGGGTGCATTTCGTTTGGTCGATTAAAGAGGAAAAAGAAGAAGCCGAAAACGAAGATGAGTTTAACGGGAAGGGTTTGGTGATCAGGGGGTGGGCCCCGCAGCTGGTGATTCTGAGGCACCGTGCGGTGGGGGCGTTCCTGACGCACTGCGGGTGGAACTCCGTGCTGGAAGCGGTGGTGGCGGGGGTGCCCATGCTTGCGTGGCCCATGACCGCCGACCAATTCATCAACGCCACGTTGCTCGTCGACGAGTTGAAGATCGCTAGGAGGGTGTGCGAGGGGGCCCAGACCGTTCCCGACTCCGACTCTCTGGCCCGAGTTCTTGCCGACTCGGTGAGTGGGAACGGCGCCGAGATGAGCCGGGCCTTGGAGCTCAAGGACGCCGCACTGCACGCCGTTAGAGAGGGTGGAAGCTCCCACAGGGATTTGCAGTGCTTCGTGGAACGGATTCTCTCTCCGTTGGACTAG 1386 0.5144 MTIVSGKERPVQKHVLVIPFPAQGHMIPLLDLTRKLASNPSLAITVVTTPANRPLLSALLSSHPSIHTLLLPFPHHPSVPPGIENVKDMPHLIRAITLSLSHLHRPLLRWLRSHPSPPTLIISDMFLGWTQNLGLPRLVFSPSAAFTFSTMCFLWIHLPKPTNHPSDVVSYHTLPNSPEFPWCQVSPMFRSYTAGDEDSENLKEWFLGNLASWGLLVNSFADLERPYFDFLTKELGHDRVWAVGPLLPEDESSVKDRGGTSSVSVNDVVSWLDKMEERKVVYICFGSQSILSGDQKEAIKSGLVKSGVHFVWSIKEEKEEAENEDEFNGKGLVIRGWAPQLVILRHRAVGAFLTHCGWNSVLEAVVAGVPMLAWPMTADQFINATLLVDELKIARRVCEGAQTVPDSDSLARVLADSVSGNGAEMSRALELKDAALHAVREGGSSHRDLQCFVERILSPLD 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00696 461 CDD GT1_Gtf-like 14 440 IPR002213 GO:0008194
Cca03g00696 461 Gene3D Glycogen Phosphorylase B; 270 440 - -
Cca03g00696 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 457 - -
Cca03g00696 461 Gene3D Glycogen Phosphorylase B; 4 269 - -
Cca03g00696 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 274 387 IPR002213 GO:0008194
Cca03g00696 461 ProSitePatterns UDP-glycosyltransferases signature. 337 380 IPR035595 -
Cca03g00696 461 PANTHER GLYCOSYLTRANSFERASE 10 455 - -
Cca03g00696 461 PANTHER UDP-GLYCOSYLTRANSFERASE 89A2 10 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00696 Cca-Chr3 12994682 12996525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00696 1 458 Glycosyltransferase AT1G73880 53.291 1.78e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00696 - - gmx:100779428 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00696 03 12994682 12996525 Cca03g00696 03 12994682 12996525 ECH