Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00695 ATGAAGGAGGCGGTGCTGGGTGGGGGAGAGAAGAGTGAGAGGAAGAGAGGGAGGGTGGTGTGGGAAGGGTTCATGACGATGGGCTTCGGCAACACCAACAACGGTAAGGTGAAGAATTCGGTGAGGCCTTCCACCATGAAGCTCTGGATGATACGCGCGACCACATCGGTCTTACTGTGGACCTGCGTCGTTCAGTTAACCGCGTTGGGTGACACGTGGGGGCCCAGAGTTTTGAAGGGCTGGCCTTCCTGCTTCACCCACGAGTCCGCGCTCATTGAGTTTCCGTCTTCCACACCCGCGGTTCTCCCTCCCAAGAGGGTTTATAAAAACAACGGCTATTTGATGGTGTCGTGCAATGGAGGATTGAACCAAATGAGAGCGGCGATATGTGACATGGTGGCGATTGCAAGGTATTTAAATGTGACGCTTATAGTGCCGGAATTGGATAAAGCGTCCTTTTGGGCTGACCCCAGTGAGTTCCAAGACATATTCGATGTGGATCATTTTATTACATCCTTGAGGGATGAGGTGAGGATATTGAAAGAGTTGCCTCCAAGACTCAAGACGAGAGTGGAAAATGGATTGTTTTACAGCATGCCACCGATTAGTTGGTCTGATTTATCTTACTATAAGAACCAGATTCTACCTTTGATACAAAAGTACAAAGTTGTCCATTTAAATCGAACAGATGCCCGGCTGGCCAATAATGGTCAACCTTTGGAGGTTCAGAGGTTGCGTTGCAGAGTCAATTTTAGTGCTCTTAGATTTACTTCTCAGATTGAGGAGTTAGGCAGAAGGGTGATCAAGCTTCTGAGGCAAAATGGCCCTTTTTTGGTGCTTCATCTGAGGTATGAGATGGACATGCTAGCATTTTCTGGCTGTACGCAAGGTTGCAACAGCGAAGAGGTGGAAGAATTGACAAGGATGAGGCAAGTATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTGTGTCCTTTAACTCCTGAGGAGACTGCCCTTACACTTAGGGCCCTAGACATCGATCAAAACATTCAAATCTACATCGCAGCCGGGGAAATATATGGTGGGAAAAGGAGAATGGCAAGTCTTGCGAAGGACTATCCAAAATTGGTTAGAAAGGAAACACTGTTGGAATCATCTGACCTTCAGTTCTTCCAAAATCATTCCTCCCAGATGGCGGCATTGGATTACCTTGTCTCATTAGAGAGTGATATCTTTGTGCCTACATATGATGGAAATATGGCCAAAGTAGTTGAGGGCCACCGCAGATATCTTGGCTTCAAGAAGACGATTTTATTGAACAGAAAGCTCCTGGTTGATTTGATAGATCAATACAGCAATGGAATATTGAACTGGGATGAATTCTCTTCAGCTGTGAAGGAAGCTCATGCCGATCGCATGGGTGGTGCAACCAAAAGATTGGTAATCCCTGACAGGCCCAAAGAAGAGGATTATTTCTATGCCAATCCAGAGGAATGTTTAGAACTGTCAGATGATATGTTGAGTAGTACGTGA 1545 0.455 MKEAVLGGGEKSERKRGRVVWEGFMTMGFGNTNNGKVKNSVRPSTMKLWMIRATTSVLLWTCVVQLTALGDTWGPRVLKGWPSCFTHESALIEFPSSTPAVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTRVENGLFYSMPPISWSDLSYYKNQILPLIQKYKVVHLNRTDARLANNGQPLEVQRLRCRVNFSALRFTSQIEELGRRVIKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNSEEVEELTRMRQVYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDIDQNIQIYIAAGEIYGGKRRMASLAKDYPKLVRKETLLESSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVDLIDQYSNGILNWDEFSSAVKEAHADRMGGATKRLVIPDRPKEEDYFYANPEECLELSDDMLSST 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00695 514 PIRSF UCP009360 25 501 IPR024709 -
Cca03g00695 514 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 39 509 - -
Cca03g00695 514 Pfam GDP-fucose protein O-fucosyltransferase 113 435 IPR019378 -
Cca03g00695 514 PANTHER OS02G0726500 PROTEIN-RELATED 39 509 - -
Cca03g00695 514 CDD O-FucT_plant 113 440 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00695 Cca-Chr3 12888000 12890839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00695 109 504 Miscellaneous Gene Families AT2G37980 49.246 1.77e-130 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00695 K23280 - gmx:100778901 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00695 03 12888000 12890839 Cca03g00695 03 12888000 12890839 ECH