Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00689 ATGTCTTGTAAAGGTAAAAGCTCGTGGCAGGAATTGATTGGCATCAATGGACAAGCAGCAACACAAATCATCATGAAAGAAAATCCAAGAGTGAAGGCCTTTACTCTTCCAGAAGGATCAGTGGTGACAGCTGATTTCAGGTGTGACAGGGTTCGAGTCTTTATTGACTATAAGGAAAATGTGACTCGGGTGCCCAAAATTGGTTAA 207 0.4203 MSCKGKSSWQELIGINGQAATQIIMKENPRVKAFTLPEGSVVTADFRCDRVRVFIDYKENVTRVPKIG 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00689 68 Pfam Potato inhibitor I family 6 68 IPR000864 GO:0004867|GO:0009611
Cca03g00689 68 PRINTS Potato inhibitor I signature 33 44 IPR000864 GO:0004867|GO:0009611
Cca03g00689 68 PRINTS Potato inhibitor I signature 8 21 IPR000864 GO:0004867|GO:0009611
Cca03g00689 68 PRINTS Potato inhibitor I signature 45 55 IPR000864 GO:0004867|GO:0009611
Cca03g00689 68 PANTHER S.GRISEUS PROTEASE INHIBITOR, PUTATIVE-RELATED 2 68 - -
Cca03g00689 68 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 68 IPR000864 GO:0004867|GO:0009611
Cca03g00689 68 Gene3D Trypsin Inhibitor V, subunit A 1 68 - -
Cca03g00689 68 SUPERFAMILY CI-2 family of serine protease inhibitors 2 68 IPR036354 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00689 Cca-Chr3 12634286 12634921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00689 - - mtr:MTR_5g045470 102.064