Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00688 ATGGGTTGGGCTATAGCTCTACACGGCGGTGCCGGAGACATCCCACTTTCACTGCCGCCGGAGCACCGCCAACCCCGAGAGCAAGCCCTCCGCCACTGCCTGCAAATCGGGGTTGAGGCTCTTCAAGCCAACATGCCTCCATTGGATGTAGTAGAGCTTGTGGTACGTGAATTAGAAAATATTCCTCAATTCAACGCGGGTAGGGGATCTGTGCTGACCAACAAAGGCACAGTTGAAATGGAAGCTTCTATTATGGATGGCAGGACAAAAAAATGTGGAGCTGTTTCTGGTCTCAAAACAGTTGTCAATGCCATTTCTTTAGCAAAATTGGTTATGGAGAAGACTCCTCATGTATATCTGGCATTTGATGGAGCAGAGGAATTTGCAAAACAACAAGGTGTTGAGACTTTAGATTCAACCCATTTCATTACTGCTGAAAATATTGAGAGACTACAGCAAGCAAAAGAATCCAACACGGTCCAGATTTATCACATTACTCGACCCCTCCAAAATGGTGCCAAGGGAGAAACACCAATTGTTGCTAATGGTGATAGTCAACTAGGAACTGTAGGGTGTGTGGCTGTTGACAGTAATGGGAACCTAGCCTCTGCTACATCCACTGGTGGACTAGTGAACAAAATGGTTGGTCGAATTGGCGACTCACCCATCATAGGTGCTGGCACATATGCCAACGAGCTTTGTGCTGTCTCTGCAACAGGCAAAGGTGAAGCAATACTACGTGCCACTGTTGCAAGAGACGTTGCAGCATTGATGGAATTCAAAGGTGTTTCTCTAAAAGAAGCTGCTGATTGTGTTGTGCATGAACGCACACCGAAAGGCACTGTTGGTTTGGTTGCTGTGTCTGCTGCAGGAGAACTTGCTATGCCTTATAACACAGCAGGCATGTTCCGAGCTTGTGCTACTGAAGATGGATATTCAGAGGTTGCAATTTGGTCTGCTTCCTAG 966 0.4689 MGWAIALHGGAGDIPLSLPPEHRQPREQALRHCLQIGVEALQANMPPLDVVELVVRELENIPQFNAGRGSVLTNKGTVEMEASIMDGRTKKCGAVSGLKTVVNAISLAKLVMEKTPHVYLAFDGAEEFAKQQGVETLDSTHFITAENIERLQQAKESNTVQIYHITRPLQNGAKGETPIVANGDSQLGTVGCVAVDSNGNLASATSTGGLVNKMVGRIGDSPIIGAGTYANELCAVSATGKGEAILRATVARDVAALMEFKGVSLKEAADCVVHERTPKGTVGLVAVSAAGELAMPYNTAGMFRACATEDGYSEVAIWSAS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00688 321 Pfam Asparaginase 3 318 IPR000246 GO:0016787
Cca03g00688 321 Gene3D (Glycosyl)asparaginase 189 321 - -
Cca03g00688 321 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 318 - -
Cca03g00688 321 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 318 IPR029055 -
Cca03g00688 321 CDD Asparaginase_2 4 311 - -
Cca03g00688 321 PANTHER L-ASPARAGINASE 1 318 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00688 Cca-Chr3 12626834 12631081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00688 5 296 Miscellaneous Gene Families AT4G00590 25.455 1.93e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00688 K13051 - gmx:100799400 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00688 03 12626834 12631081 Cca03g00688 03 12626834 12631081 ECH