Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00663 ATGGAGAGGTGTTATGGTGAGAAAGGGTACAAGCAGAACTCAAAGAAAATAGACCTTGGTCTAAAGCTTTCACCTTGTGGTGAGAATGCAGAAGGAGTGGGGTTGAGAAGGGCATCATCATTAGTGGGTGTGGCAAATGGGGCCCAGTGGGGCCCACCTCTTAGCAGATCTTGCTCACTGCCAGCAGAGAGGCTGAGGAGGGTGCCTGCACTCTCACCTCAACTGCTTGCTTGGGTGGCTGCTTCTGCTGTCAATGTTGTCAACACACCATCACCACTTCACAAACTCAACCCACACCCAAATTCTTCTCAGGATACACTCACAGTCACAGGTGTCTCACACAACAATCCATATATAGGCCACAGACAATCAGCCGAAGGAGTCGCTTTGAACATCCAAACATCAACCAAGCCAGAAAACGATTCCACGGCTTCCCAGAAGGCAATGGCCAAGGAAACTCCACCTAGGCCAGCCAATACCAAGCCGGAGAATCCGGCCAAAAGGCATAAACTGGGGAACTACTGCAGCCTTAAAGGCGATGTAATGGAGATCCTGAGGCAGATGCCAAGTGTGACTACTACTGGAGATGGCCCCAATGGGAGGAGAATAGAAGGGTTCCTGTACAAGTATAGGTCTGGTGAAGTGTGCATTGTTTGTGTGTGCCATGGTAGCTTCCACACTCCAGCAGAGTTTGTGATGCATGCTGGGGGAAAAGAAGTGGCCAACCCCATGAAGCATATCACTGTTTTTTCTAACTCATTTTAG 765 0.4954 MERCYGEKGYKQNSKKIDLGLKLSPCGENAEGVGLRRASSLVGVANGAQWGPPLSRSCSLPAERLRRVPALSPQLLAWVAASAVNVVNTPSPLHKLNPHPNSSQDTLTVTGVSHNNPYIGHRQSAEGVALNIQTSTKPENDSTASQKAMAKETPPRPANTKPENPAKRHKLGNYCSLKGDVMEILRQMPSVTTTGDGPNGRRIEGFLYKYRSGEVCIVCVCHGSFHTPAEFVMHAGGKEVANPMKHITVFSNSF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00663 254 MobiDBLite consensus disorder prediction 135 170 - -
Cca03g00663 254 MobiDBLite consensus disorder prediction 135 149 - -
Cca03g00663 254 Pfam Tify domain binding domain 217 249 IPR032308 -
Cca03g00663 254 PANTHER AFP HOMOLOG 2 11 252 IPR031307 GO:0007165
Cca03g00663 254 PANTHER NINJA-FAMILY PROTEIN AFP1 11 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00663 Cca-Chr3 11990753 11995034 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00663 - - gsj:114416626 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00663 03 11990753 11995034 Cca03g00663 03 11990753 11995034 ECH