Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00658 ATGGAAGGGTTGGTGAGTTCCGGGATCAACACGGTTCGTGTTTTTGGTGTTGGAAAGCACCATTCTCGTTTTCTTCCTTCATCAACGTTGCATCTGAGGAATAGTGTGTGTGGAATTGGAATTGGAATTGGGGTTGTGAAGAAGAGTAAGAAGAAGCAGTGTGTCGTTGTGGCTGCTTCTGTTGGGGGCTCCAAAGTGGGCCATTTTGAGAACACACTCCCTTCCAAAGGTTGTTGTATTATTATATTGTTTATAAATATGCATGGTATGTGTTTGATGTTATTTGCGTCATGTTTTTGGTGGAACTATAAAGTGGTGTTTTCTGTGATGGTAGAGGTTCTTGAGCTTTGGAGAAATGGGGATGCTGTGTGCTTTGATGTGGATAGCACTGTGTGTCTGGATGAAGGGATTGATGAGCTTGCTGAGTTTTGTGGGGCTGGAAAGGCTGTTGCTGAATGGACTGCTAGAGCGATGGGTGGTTCTGTTCCATTTGAGGAAGCCTTGGCTGCTAGGCTGTCTTTGTTCAATCCCTCTTTGTCTCAACTTCAGAATTTTCTTGAGCAAAAGCCACCAAGGCTTTCCCCAGGCATTGAAGAGTTAGTCCAGAAGTTGAAGGCTAATGACATGGCTGTTTATCTGATCTCTGGTGGCTTCCGTCAAATGATCAATCCTGTTGCATCAATACTTGGGATTCCACAAGAGAATATTTTTGCCAATCAACTACTTTTTGGTAGCTCTGGAGAGTTTCTGGGGTTCGATAAAAATGAGCCTACTTCAAGGAGTGGAGGAAAAGCTGTTGCTGTCCAACAAATCAAGAAGGCGCATGGTTTCAAAACTTTAACTATGGTGGGAGATGGTGCTACTGATTTTGAGGCTCGTAGACCAGGTGGTGCTGACTTGTTCGTCTGCTATGCGGGTGTTCAACTTCGAGAATCTGTTGCTACAAAAGCTGATTGGCTAGTTTTCAATTTTAAGGACCTCATAAATTCCTTGGGGTAA 999 0.4384 MEGLVSSGINTVRVFGVGKHHSRFLPSSTLHLRNSVCGIGIGIGVVKKSKKKQCVVVAASVGGSKVGHFENTLPSKGCCIIILFINMHGMCLMLFASCFWWNYKVVFSVMVEVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFNPSLSQLQNFLEQKPPRLSPGIEELVQKLKANDMAVYLISGGFRQMINPVASILGIPQENIFANQLLFGSSGEFLGFDKNEPTSRSGGKAVAVQQIKKAHGFKTLTMVGDGATDFEARRPGGADLFVCYAGVQLRESVATKADWLVFNFKDLINSLG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00658 332 Gene3D - 184 331 IPR023214 -
Cca03g00658 332 SUPERFAMILY HAD-like 96 331 IPR036412 -
Cca03g00658 332 PANTHER BNAA06G12800D PROTEIN 111 331 - -
Cca03g00658 332 CDD HAD_PSP_eu 121 324 - -
Cca03g00658 332 Gene3D Phosphoserine phosphatase; domain 2 133 183 - -
Cca03g00658 332 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 122 293 - -
Cca03g00658 332 Pfam haloacid dehalogenase-like hydrolase 121 294 - -
Cca03g00658 332 PANTHER PHOSPHOSERINE PHOSPHATASE 111 331 - -
Cca03g00658 332 TIGRFAM serB: phosphoserine phosphatase SerB 113 317 IPR004469 GO:0006564|GO:0036424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00658 K01079 - gmx:100814193 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00658 03 11850182 11855441 Cca03g00658 03 11850182 11855441 ECH