Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00646 ATGGGAGGCGAGGAGAAGCGGCACCAGATGATGCAGAACCTCTTCGGCGACCAATCCGAGGAGGAAGAAGAGCTCGATTCCGAGCACGAATCCAATCCGCAACTCAATTACCCTTCCgacgagggcgaaggaggcggcggcgccgagcaggagggcgagggcgaagtggagggtcagggcgaggtcgagatagagagcgacggcgacggcgagcccgaccccggcgagagcgagggcgagagggagCAAAGCTCGCAGGAGGTGGAAGCCGGGGAGAGAGAAGAGAGCGAGGGGAGAGACTCCGATAGCGACGTCAAAGACGACGGCGACGGTTACAGCCAGCGCGGCGTCACCAGCAAGCGCAGGGACGACGTCGTCGAGACTGGATCTGAGAGGTCCGAGGAGAACCATTACGCTCCACACGACGACGAGGAAGAGGAGGTTGACGAAGCCAGAAGCCCTAGTGGGTCACCCAGAGATGAAAAAGATGAGACTCGTGACCAGCATTCAGCCCCTGAAATTCGTGATGTATTTGGTGATTTTGATGATGATGAAGAGGAGGAAATGGGGTTTGCAGTTCAGCAGGATATGGAACAAGATTCAAATAGATATCCTGTGGAGGAGGAAGGAAGTTATGGAAAGAACCTGAGACCAGAAGATATACTTGCTGATGAAGATCATCAGTATGAATCTGAAGAGGAAAACATTGAGATAAAAACTAAAGAGAAGCCACTTGGCCCCCCTTTAGAGTTGGAGGTTCCATTACGACCACCTCCCGCTCTACCAGAAAAGATGAACATGATTAAAGTTTCCAATATTATGGGTGTTGATCCAAAACCATTTGACCCTAAAACATATGTGGAAGAGGATACTTTTGTAACTGATGAATCTGGAGCTAGAAAGCGCATACGTTTGGAGAACAATATTGTACGCTGGAGGACTACTAGAAATCCTGATGGCACAACATCTTGTGAAAGCAATGCTCGCTTTGTGAGGTGGTCTGATGGCAGCCTGCAGCTATTAATTGGGAATGAAGTTCTAGACATATCAGTGCAAGATGCACAGCATGATCAAGCACATCTTTTTCTTAGACATGGAAAGGGAATACTCCAATCACAAGGAAGGTTATTAAGAAAAATGAGGTTTATGCCATCTTCCTTGTCATCAAATTCTCATCGTCTGTTGACTGCTCTTGTTGACTCAAGGCATAAGAAGGTTTATAAGGTTAAAAACTGCATTACTGACATTGATCCTGAGAGGGAAAAAGAGGAAAAGGAGAAGGCTGAAAGTCAAACAATCCGGGCTAATGTGCTGCTCAACCGAAAGCGTGAGAAGGTGAGCCGGAAATATACTCCAGCGGTGGATAGGAGGCGCCAACTTTCACCTGGGTTTTTAGAGGATGCTTTGGATGAGGAGGATGAAACAGATTATTATGATTCTCGTCGTTCTCAGCGTCGCTTTGAGGATGATTTGGAAGCGGAAGCCCGAGCAGAGAAACGAATTATGAATGTTAAAAAGTCACAGGGACCCAAAGATATCCCCCGAAAATCTTCCTTCCCACCTGCTAAATCCTCTCGGAATCCAATGGGTTACCAAGATGATGAGAGAGAAGAGTCTGAGTATGAAACTGATGATGAGGAAGATGAGAGGCCTCCTTCACGTAAGAGGGATGAGGATACTGAGCCAGAGTATgaggatgaggaagaagaagaagaacactatgaagaagcagaacaagttaatgatgcatcagatgaggaggaagaggaGGAACCCAAGCAAAAGAGTAAGGAGTTTAGAAGCAGCACCAAAAGGAAGGGATTTGAATCTGATGAGGACTCTCCTCCTAGGAAAACAACCACCCATAGGCGAATGGCGGTTGTGTATGACAGTGATGAGGAATGA 1905 0.4142 MGGEEKRHQMMQNLFGDQSEEEEELDSEHESNPQLNYPSDEGEGGGGAEQEGEGEVEGQGEVEIESDGDGEPDPGESEGEREQSSQEVEAGEREESEGRDSDSDVKDDGDGYSQRGVTSKRRDDVVETGSERSEENHYAPHDDEEEEVDEARSPSGSPRDEKDETRDQHSAPEIRDVFGDFDDDEEEEMGFAVQQDMEQDSNRYPVEEEGSYGKNLRPEDILADEDHQYESEEENIEIKTKEKPLGPPLELEVPLRPPPALPEKMNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGARKRIRLENNIVRWRTTRNPDGTTSCESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNCITDIDPEREKEEKEKAESQTIRANVLLNRKREKVSRKYTPAVDRRRQLSPGFLEDALDEEDETDYYDSRRSQRRFEDDLEAEARAEKRIMNVKKSQGPKDIPRKSSFPPAKSSRNPMGYQDDEREESEYETDDEEDERPPSRKRDEDTEPEYEDEEEEEEHYEEAEQVNDASDEEEEEEPKQKSKEFRSSTKRKGFESDEDSPPRKTTTHRRMAVVYDSDEE 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00646 634 Coils Coil 222 242 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 201 217 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 1 217 - -
Cca03g00646 634 Pfam Leo1-like protein 267 426 IPR007149 GO:0006368|GO:0016570|GO:0016593
Cca03g00646 634 MobiDBLite consensus disorder prediction 178 193 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 449 465 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 590 634 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 151 177 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 46 76 - -
Cca03g00646 634 PANTHER LEO1 PROTEIN 2 634 IPR007149 GO:0006368|GO:0016570|GO:0016593
Cca03g00646 634 PANTHER BNAANNG06810D PROTEIN 2 634 - -
Cca03g00646 634 Coils Coil 567 590 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 500 634 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 449 485 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 77 139 - -
Cca03g00646 634 MobiDBLite consensus disorder prediction 561 589 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00646 K15177 - gmx:100791454 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00646 03 11448634 11458218 Cca03g00646 03 11448634 11458218 ECH