LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca03g00644	ATGCCTGGAAACGAAGTAGGAGACAGGGTCCATAATTTTTTTGGTCAAGAGAACTTGTCCCAGGGACAATATCATTCTCAGGCGGTTGATGGGAACTGGACAGGACTAAGCAACAATTTGTGGGCTGGTAGCCAGAGACCAACTGGTGTCCCTTTTTTTTCCAATTTGAAGAATTTTAATCAACAGCAATCAGATCCTGAGCAGGGGCACGCAGGCTCTCCACATTTGCGACATGGTTTGAACCTATCTCAGTCTAGTTTGAGGCCTGAGTCTGGCAGAAATCTGCTGCCAAACCAACAGTCAGCTGTGAATGGCTATATTCAGGGACAACAGGTGTTTCAGACCAGGCAGAATGAAGCTAACATTATGGGACTGGAGAATGAATCTGATTGGCATAATCTGTCAAGAGGAATATCAGTGCTGGAGTCACAAGGGAGTGCTCTTGAACTCTATAAGAAAAACATGGCTAGGAATGATGCTGCTGAATCTCCTGTCAATTTTGATTTTTTTGGAGGTCAACAGCAAATAGGTGGACGACATAGTGGAATGCTTCAACCTCTACCCACACAGCAGCCAGGAATAAATGAAATGAATCTATTACAGCAGCAAGCAGTACTTAACCAGATGCAAGAAATTCGGAGGCAGCAACAATTTCATCAATTAGAAGCAAAGCAACAGAATTCTATGACTCCACCTTCCTCTATTTCAAAACAGGCAGTTTCTAGCCATTCTGCATCTCTCATCAGTGGCATTCCTATTAATGAAGCATCTAACCTTATATGGCAGCCTGAAGTTATACAGAATAATGCTAATTGGCTCCAGCACAGTGCCTCTCCAGTTCTGCATGGGTCCTCTAATGGTCTTATGTTATCCCCTGAACAAGGACAAGCATTGCGCATGATGGGTTTGGTTCCTAATCAGGGTGATCAGTCTCTTTACGGGGTTCCAATTTCTGGTTCAAGAGGCACTCCTAACCTGTATTCTCATGTTCAAGCAGATAAGACTGCAATGCCTCCTGTATCTATCCCACACCAGTATTCTCATGTTCACGGGGACAAACCTGCACTGCAGCAGATGTCAGCCGGTGATAATTCATTTGCTACTCATCAATATGCTGCATTTTCAGATCAAATTAACACAAATGATGGGGCTTCAGCTTCAAGGCAGGATGTTCAAGGAAAAAGTATGTTTGGTTCTACTGCTCGCGGTATAAATAGTGGACTGAATATGGAGAACTTGCAGCAAGTGAATTCTGAGCCAAGAATTGTGCCAATGCAAGATTTTCATGGGAGGCAAGAACTAGCTGGATCTTTGGAGATGTCGCAGGAGAAGATGCTAGTGCAGGCTCCTCCTTCACAGAATGTGGCTACCTTAGATCCAACTGAGGAGAAGATTTTGTTTGGTTCAGATGACAACCTGTGGGATGGATTTGGCAGGAATACAGGTGGTTTCAGTATGCTGGATGGTATGGATAGTTTAGGTGGGTTTCCATCTATTCAGAGTGGGAGTTGGAGTGCACTAATGCAGTCTGCTGTGGCAGAAACTTCTAGTAGTGACTTAGGCAAACAAGAGGAGTTGAGTGGTTCAAGTTTTCGGAATATGGGACGGTCATCTGGAAATGAGCGGTCTTCAACAATTGATAGCAGCAAACAGCAATCTGTTTGGAGTGACAGTAACTTGCAATCAGCATCCAATATAAATTCAAGACCTTTTCTTCGATCTGATGATGTTTGTAGGCCAAATGCAACTGAAAATTATTCTGGTGTTTCTGGGTTTCATCAGTTAGGTCTTGATACTTCACACGAACAGCATGAAAAGTTAGAGAACAATTCTCAGAGATCAATTCCACAGTTTTTGGAAAGAGGCAAATGGTTAGATTGCAGTCCTCAGCAAAAACAACTTGCGGAAGGGGGTCATATATTTGGAAATGCTGCTAACTCTTCAAGTTTAGAAAAAAATCAACAGAGCATATTGTCAGGTAATAGTAGTGGTGATCCTTTCAATAAATCTAATGGATGGGATATTATGAAATCACCGCCATTTGATAGGAGTTCAAATTTCAAAACCCTTGAAAATGAAAACTCATTTCAGCCCCATCATGAGAAAGCCATGCATGAGATGGGACAGGTTCCTGCTATGTGGGAACCTGATTCTGATACTAATTCATCTATTGGAGGGGAACATGTGAAGTCTGCAGGTAATATGCAGGTTTGTGGGGAAGATTCTGGTACAAATGGTATTGCTGCATCGCCAAATTCAGGCATCGCATGGTTCAGCCGGCAAAGCAGCAAGCAGCTCCCTAATGTTGATGAATGGAGGGATGCAGAGTCTGCAGGGAGCTATAAAAGAAATGAAGGTCCAGGAAAGTATAAGCATCATATGGAGAAGAACCCCTTAGTTTTGGAATCATCAAAGAATGGAAAGGTAGAAAGTGAGACTCATGATTTTGAGAACCCTTACCAAAAGGAAAAATTAGCAGATGGTGTTGGATCGAATGCATCTCTTCCTAGAGCTGGTGGTATGAGAGAAAATACCAGTTTTGATGGCAATGATTTGCATAGTCCAAAGTTATCTGGTCAGGGAAATCGAAGGCCTCCTGTAACTCGTAAATTTCAGTATCACCCAATGGGGGATCTGGGTGTTGAAGTTGAACCTTATGGAAACAAACATGGGTTCAATTCACAGCCTATGCCCCATCAACCCTTTGGAGGACTTAAAGATCAGGACCAAAGCTATCCTGGACAGTCAAAATATGGGCATTCTGAAGGGAATTATAATCAAATGAATAAGGATGACTCAAAAATCTTGGATAATAATCCTTCAAAAAGCATACTGCCTGGTCAAATGTCAAAAAAATTAACCTCATTGGATAGAAGTGTTGGGAATTATGCCTCACAGAGGACTGCTTCACCCAGGGTGCCTGAAACTGAATCCTCTGATGGATCTGTTGTACATCCTCAGCAGAATCAAAGTTTTTTGTCTCAGGGCTTTGGTTTACAATTAGCTCCTCCTACTCAAAGGCTTCCTGTGGTGTCTTCTCATGGCTCATTAGAGACAGATCGTCATACTACACTACATGTGTCTGAGACAAGGGAAAGGGACCATATGTGGTTGGGTACTAATCAGACTTTCCCTAAAGTTGTCTGGTCAAGTGTTTATGGCATTGCAACAAACACAAGTTTTTCTAACTGCCATTTATCTTCCAGGGTGCCTGAAACTGAATCCTCTGATGGATCTGTTGTACATCCTCAGCAGAATCAAAGTTTTTTGTCTCAGGGCTTTGGTTTACAATTAGCTCCTCCTACTCAAAGGCTTCCTGTGGTGTCTTCTCATGGCTCATTAGAGACAGATCGTCATACTACACTACATGTGTCTGAGACAAGCGAAAGGGACCATATGTGGTTGGGTACTCATCAGACTTTCCCTACCCGGGATCCATCTCATGGGGAGCTTAGGAGTAATATTTCTAGCACCACAGGACAAATTTTTGATAAGGCCTCGCAATATGGCATGCTGGGAAACATTCCTCAGGCTTTTACATCTGGCTTTCCTTTCTCCAGGATTCATACTCAAAATCAAAATTTGACAAATCTTGGTATTGCAAATACTCAATCTACTAATGGAAATTTCACTGCTTCAATGAACCAGGCAGATGAATATTGTGAAAAAGCTCAAACTAGTCAGTCTGATTTGGGTTCTGCTCAGGACATGTCCCAGATGAGCGGTATAGACCAAGATCATCTGAGAGATCCCACCATCCAAAGTTTGACAGCAGAGGCTGGCACCCAACCTTCTGCTACATTTAGTAAATCTCCACATGGCTCCACTTCAAAAGTTCCGCACAATGTATGGACCAGTGTTTCTAACAAGCAACATCCTAATGCTTCAAGGTTTCTATCCTCGCCCCAGAAAATTAATGATTGTGAAATGGCAGTTGGCTCACAGAAGCCAGGTGACGAGGGTCTGGTAAAAGATGGTAATGACCTTTCGGGTACTGGTCCTTGTTCTGCTTACTTCAATAGTTCTGTGGGGAATTCGCTTCAAGAAATCTCTGTGAAGCAGACATTGCCTGAAAGTGTTGTCGCTGCTGAAGAGGCTGCAGGTGCATCACACCTGAAGGAAGCTGTTGGGAAACATATGTTTGATGTATCTCAACCTAGCCCCGCTGCTACCTCCAGAGATATTGAAGCTTTTGGCCGATCTTTAAGACAAAACGATGTTTTGAATCATAATTTTTCTTTGTTGGATCAAGTTCAATCCATGAGAAATGCGGAGACTGATAGAAATGCAGAGACTGATAGAAATGCAGAGACTGATCCTAGTATTCGTGATGTCAAGAGATTGAAAGTTTCTGATAATGTGGTGGACAAACAGCTGGTAGATTCCAATAATGGGCAACAGTTGTCATATGGATATGATAATGTAGTCAAAGACGGGTCAGGTAATAATTCCATGCCATCATCAGATCCTAATATGCCAAGGTTTTCAACAAAGCCGCTTGATGGACAGGACACAAATGCACTTAATGCCACTGACAGTAATATAGCAACTTCTAAGAGTGAGTATTCTCTGGTAAATCCTCAGATGGCACCATCATGGTTTGAGCGATATGGAACTTTTAAGAATGGTACGATGTTGCCAGCATATAATGTACAGAAGATGACTGCTTCTAAGATTATCGACCAGCCTTTTGTTGTACCATACCAATCAGATAGTTTGCATTTTTACAATTCAATAGAGCAAATTAACAGTGTCAGTGATGCTCAACTAAGTAATGCTAGGCAAAGTCCAATGCCTGCTTCAGTTGCAAGTGAGCATGCAGATTCTCAGTTATCAACACCTGCTGTTGAACATGACTTACTTATTACGAGACCGAAGAAGAGAAAAAGTGCCACTTCTGAACTTCTACCATGGCATAAAGAACTGTTACAGGGTTCTGAAAGGCTTCGAGATATCAGTGTGGCAGAATTAGACTGGGCTCGAAGTGCAAATAGACTGATTGAGAAGGTTGAAGACAATGTGGAGGTAGTCGAAGATTTGTCAGCAGTGGTGAAGTCAAAAAGAAGACTTGTCTTGACTACACAGCTTATGCAGCAACTACTTAGCCCTCCTCCAGCTTCAGCTCTTGTAGCAGATGTGAAGTTGCATCATGAGAGTGTGGTCTACTCTGTTGCCAGATTAGCTTTAGGAGAAGCATGCAGTTCTATCTCATGGTCTAGATGTGATACACTCTTGCCTGCTGCTAACAAGGACCTGCTGCCTGAGAAGTGTAAATCATCCAATAAAACTGATCATTACATTTTGAAAGTTACAGACTTCGTTGGCAGATCAAGGAAACTGGAAGATGATATATTGAGATTGAATAGCAAAGCCTCTATTTTGGACTTGAGAGTGGAGTGTCAGGATTTAGAAAGATATTCTGTCATCAACCGATTTGCCAAGTTCCATGGACGGGGACAAAATGATGGGGCAGAGGCATCATCATCTTCTGATGCAAATACTAATGCTCAAAAACCATTCCCCCTAAAATATGTTACTGCAGTTCCATTGCCTAGGAATCTCCCAGACAGGGTTCCAAGCCATTTGTATATAGCAAAATTATATATGGAGTCTATTAAGGTTTAG	5625	0.4228	MPGNEVGDRVHNFFGQENLSQGQYHSQAVDGNWTGLSNNLWAGSQRPTGVPFFSNLKNFNQQQSDPEQGHAGSPHLRHGLNLSQSSLRPESGRNLLPNQQSAVNGYIQGQQVFQTRQNEANIMGLENESDWHNLSRGISVLESQGSALELYKKNMARNDAAESPVNFDFFGGQQQIGGRHSGMLQPLPTQQPGINEMNLLQQQAVLNQMQEIRRQQQFHQLEAKQQNSMTPPSSISKQAVSSHSASLISGIPINEASNLIWQPEVIQNNANWLQHSASPVLHGSSNGLMLSPEQGQALRMMGLVPNQGDQSLYGVPISGSRGTPNLYSHVQADKTAMPPVSIPHQYSHVHGDKPALQQMSAGDNSFATHQYAAFSDQINTNDGASASRQDVQGKSMFGSTARGINSGLNMENLQQVNSEPRIVPMQDFHGRQELAGSLEMSQEKMLVQAPPSQNVATLDPTEEKILFGSDDNLWDGFGRNTGGFSMLDGMDSLGGFPSIQSGSWSALMQSAVAETSSSDLGKQEELSGSSFRNMGRSSGNERSSTIDSSKQQSVWSDSNLQSASNINSRPFLRSDDVCRPNATENYSGVSGFHQLGLDTSHEQHEKLENNSQRSIPQFLERGKWLDCSPQQKQLAEGGHIFGNAANSSSLEKNQQSILSGNSSGDPFNKSNGWDIMKSPPFDRSSNFKTLENENSFQPHHEKAMHEMGQVPAMWEPDSDTNSSIGGEHVKSAGNMQVCGEDSGTNGIAASPNSGIAWFSRQSSKQLPNVDEWRDAESAGSYKRNEGPGKYKHHMEKNPLVLESSKNGKVESETHDFENPYQKEKLADGVGSNASLPRAGGMRENTSFDGNDLHSPKLSGQGNRRPPVTRKFQYHPMGDLGVEVEPYGNKHGFNSQPMPHQPFGGLKDQDQSYPGQSKYGHSEGNYNQMNKDDSKILDNNPSKSILPGQMSKKLTSLDRSVGNYASQRTASPRVPETESSDGSVVHPQQNQSFLSQGFGLQLAPPTQRLPVVSSHGSLETDRHTTLHVSETRERDHMWLGTNQTFPKVVWSSVYGIATNTSFSNCHLSSRVPETESSDGSVVHPQQNQSFLSQGFGLQLAPPTQRLPVVSSHGSLETDRHTTLHVSETSERDHMWLGTHQTFPTRDPSHGELRSNISSTTGQIFDKASQYGMLGNIPQAFTSGFPFSRIHTQNQNLTNLGIANTQSTNGNFTASMNQADEYCEKAQTSQSDLGSAQDMSQMSGIDQDHLRDPTIQSLTAEAGTQPSATFSKSPHGSTSKVPHNVWTSVSNKQHPNASRFLSSPQKINDCEMAVGSQKPGDEGLVKDGNDLSGTGPCSAYFNSSVGNSLQEISVKQTLPESVVAAEEAAGASHLKEAVGKHMFDVSQPSPAATSRDIEAFGRSLRQNDVLNHNFSLLDQVQSMRNAETDRNAETDRNAETDPSIRDVKRLKVSDNVVDKQLVDSNNGQQLSYGYDNVVKDGSGNNSMPSSDPNMPRFSTKPLDGQDTNALNATDSNIATSKSEYSLVNPQMAPSWFERYGTFKNGTMLPAYNVQKMTASKIIDQPFVVPYQSDSLHFYNSIEQINSVSDAQLSNARQSPMPASVASEHADSQLSTPAVEHDLLITRPKKRKSATSELLPWHKELLQGSERLRDISVAELDWARSANRLIEKVEDNVEVVEDLSAVVKSKRRLVLTTQLMQQLLSPPPASALVADVKLHHESVVYSVARLALGEACSSISWSRCDTLLPAANKDLLPEKCKSSNKTDHYILKVTDFVGRSRKLEDDILRLNSKASILDLRVECQDLERYSVINRFAKFHGRGQNDGAEASSSSDANTNAQKPFPLKYVTAVPLPRNLPDRVPSHLYIAKLYMESIKV	1874

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	888	985	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	1422	1442	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	515	576	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	515	571	-	-
	Cca03g00644	1874	PANTHER	DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN	1066	1860	-	-
	Cca03g00644	1874	PANTHER	DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN	1	1047	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	1260	1280	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	909	985	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	772	796	-	-
	Cca03g00644	1874	PANTHER	SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED	1066	1860	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	651	669	-	-
	Cca03g00644	1874	PANTHER	SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED	1	1047	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	1108	1128	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	59	97	-	-
	Cca03g00644	1874	Coils	Coil	1660	1680	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	827	866	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	651	688	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	1426	1442	-	-
	Cca03g00644	1874	MobiDBLite	consensus disorder prediction	78	97	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca03g00644	Cca-Chr3	11376624	11387842	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca03g00644	-		-	gmx:100800079	2452.94

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca03g00644	03	11376624	11387842	Cca03g00644	03	11376624	11387842	ECH