Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00643 ATGTCATCGTCGCACACCAACGATCCCCGTCAGCCTTCGGCGGCGAGACCCTACGTGGCGCCGCAGGTGGCGCCGCAGGATCTTCCGGTCGGTTACGCCGGTTTCATCGCCGTCATATTTGGCGTCGCCGGCGTCATGTTCAGGTACAAATTGAGCTCTTGGCTGGCTCTCATATTCTGCGCGCAATCCGTCGCCAACATGCGGAATATCGAGAATGATCTCAAACAAGTTATGATGGCTATGATGTTTTCTTTAATGGGATTGATAACAAACTACTTTGGACCTCCTAGACCAGGCAAACAAAGTTGA 309 0.5243 MSSSHTNDPRQPSAARPYVAPQVAPQDLPVGYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQSVANMRNIENDLKQVMMAMMFSLMGLITNYFGPPRPGKQS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00643 102 Pfam PAT complex subunit Asterix 6 99 IPR005351 GO:0030176|GO:0044183|GO:0045048
Cca03g00643 102 PANTHER CGI-140 1 101 IPR005351 GO:0030176|GO:0044183|GO:0045048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00643 K24963 - gmx:100500245 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00643 03 11353497 11359122 Cca03g00643 03 11353497 11359122 ECH