Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00637 ATGGGTTGTTTCGCCAGCAAAAACGCTGACACCAAGGCTACTAGGACCGCGCGTTGGCGATCCACGGGCATTGTTGCTTTGCGCGATTCAAAATTGAAGACATTTCCGGACGAAGTTCTTGAGTTAGACAGATCTGTTCGAACGCTTGACTTGACCCATAATCGAATAGTTGACATTCCCGTGGAAATCAGCAAATTAATTAATGTACAGCGCCTGGTATTAGCGGAGAACCTCATTGAGAGATTGCCAGTGAATTTGGGGAAACTCCAATCTCTGAAACTGATGAACTTGGATGGAAATCGAATTACTTCCTTGCCTGATGAATTGGGCCAGTTAGTAAGGCTTGAACGCTTATCCATCTCCGGCAATTTATTAACATCCTTGCCCGCAACTATTGGAAGTTTGAGAAATCTGGTGCTTTTAAATGTGTCAAATAACAAGTTACAGTCTCTCCCAGAATCTGTTGGAAGTTGCTTCTCTTTGGAAGAATTACAAGCTAATGATAACGTTATTGAAGATCTTCCCTCTTCGGTGTGCAATCTATCTCACTTGAAGTCACTTTGCTTGGACAACAACAATGTGAAGCAGATACCTCTGAATTTATTGAAAGAGTGCAAAGCTCTTCAGAGCATATCACTGCATGGTAATCCTATATCAATGGATCAATTTCAGCAGATGGAGGGGTTTCAAGAGTTTGAAGCAAGGAGGAAAAAGAAGTTTGACAAGCAAATCGAATCAAACGTGATGATCGGTTCCAAAGGTCTTGATGAGGGTGTTGATCTATGA 786 0.4198 MGCFASKNADTKATRTARWRSTGIVALRDSKLKTFPDEVLELDRSVRTLDLTHNRIVDIPVEISKLINVQRLVLAENLIERLPVNLGKLQSLKLMNLDGNRITSLPDELGQLVRLERLSISGNLLTSLPATIGSLRNLVLLNVSNNKLQSLPESVGSCFSLEELQANDNVIEDLPSSVCNLSHLKSLCLDNNNVKQIPLNLLKECKALQSISLHGNPISMDQFQQMEGFQEFEARRKKKFDKQIESNVMIGSKGLDEGVDL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00637 261 ProSiteProfiles Leucine-rich repeat profile. 183 203 IPR001611 GO:0005515
Cca03g00637 261 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 253 - -
Cca03g00637 261 Gene3D Ribonuclease Inhibitor 4 244 IPR032675 -
Cca03g00637 261 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED 2 253 - -
Cca03g00637 261 SMART LRR_typ_2 89 111 IPR003591 -
Cca03g00637 261 SMART LRR_typ_2 112 134 IPR003591 -
Cca03g00637 261 SMART LRR_typ_2 135 158 IPR003591 -
Cca03g00637 261 SMART LRR_typ_2 181 204 IPR003591 -
Cca03g00637 261 SMART LRR_typ_2 44 65 IPR003591 -
Cca03g00637 261 SMART LRR_typ_2 66 88 IPR003591 -
Cca03g00637 261 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Cca03g00637 261 SMART LRR_bac_2 181 200 - -
Cca03g00637 261 SMART LRR_bac_2 160 177 - -
Cca03g00637 261 SMART LRR_bac_2 89 108 - -
Cca03g00637 261 SMART LRR_bac_2 112 131 - -
Cca03g00637 261 SMART LRR_bac_2 135 154 - -
Cca03g00637 261 Pfam Leucine rich repeat 44 102 IPR001611 GO:0005515
Cca03g00637 261 ProSiteProfiles Leucine-rich repeat profile. 137 158 IPR001611 GO:0005515
Cca03g00637 261 SUPERFAMILY L domain-like 24 221 - -
Cca03g00637 261 ProSiteProfiles Leucine-rich repeat profile. 45 66 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00637 46 219 Receptor kinase-like Gene Family AT5G46330 31.220 5.37e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00637 - - gmx:100807758 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00637 03 11209376 11218117 Cca03g00637 03 11209376 11218117 ECH