Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00631 ATGTTTGGTTCAAAGAAAAGTCCTTTGAGAGATGCTAAACCTAGCTCTGTTGGCCCTGTTCACAACCCCTTTGATTCTGATGAAGAGACAAAAGACACAAAGTACAATTCCTCTAAGAAGACTTTGACCAACACCAACCCCTTTGATGATGATGTTGTTTCCACCGGCCACTCTTCATCGTCTTCTTATGCTCGTTCCTATGCGGATCGAAATAGGTATCAGAACGATTTCCGCGACTCAGGTGGATTGGAGAGTCAATCAGTGCAGGAATTGGAGAACTATGCTGTTTACAAGGCTGAAGAGACCACAAAATCTGTGAACAATTGTTTGAAGATAGCAGAGGAAATGAGGGAGGATGCTTCCAAGACTTTGGTGATGCTGCACCACCAGGGTGAGCAGATTACAAGGACTCACCATGTTGCTGCTGATATTGATCACGATTTAAGTCGGGGAGAAAAGCTTTTGGGAAGTCTTGGTGGCATGTTCTCCAAAACTTGGAAACCTAAGAAGACAGGTGCAATAACTGGCCCTGTTGTTTTTGGAGATGATCCGGTGAGAAGAAAGGGCAACCACTTGGAGCAAAGAGAGAAGTTAGGATTGACTTCTGCCCCTAAAGGGCAGTCGAAGTCAAGGACAAAACTTCCTGAGCCAACAAATGCCCTCGAACAAGTTGAGGTTCGTATTGACTTGGTGAAGAATTGA 702 0.4473 MFGSKKSPLRDAKPSSVGPVHNPFDSDEETKDTKYNSSKKTLTNTNPFDDDVVSTGHSSSSSYARSYADRNRYQNDFRDSGGLESQSVQELENYAVYKAEETTKSVNNCLKIAEEMREDASKTLVMLHHQGEQITRTHHVAADIDHDLSRGEKLLGSLGGMFSKTWKPKKTGAITGPVVFGDDPVRRKGNHLEQREKLGLTSAPKGQSKSRTKLPEPTNALEQVEVRIDLVKN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00631 233 MobiDBLite consensus disorder prediction 1 67 - -
Cca03g00631 233 MobiDBLite consensus disorder prediction 183 220 - -
Cca03g00631 233 MobiDBLite consensus disorder prediction 201 217 - -
Cca03g00631 233 MobiDBLite consensus disorder prediction 37 67 - -
Cca03g00631 233 CDD SNARE_SNAP25N_23N_29N_SEC9N 93 157 IPR044766 GO:0005484|GO:0031201
Cca03g00631 233 SUPERFAMILY SNARE fusion complex 86 156 - -
Cca03g00631 233 Gene3D - 82 160 - -
Cca03g00631 233 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 227 - -
Cca03g00631 233 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00631 Cca-Chr3 11093769 11096274 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00631 K18211 - gmx:100806698 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00631 03 11093769 11096274 Cca03g00631 03 11093769 11096274 ECH