Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00622 ATGGCATTATTGGGCATGAGTGCAAACATGCGATGCAATGGCTATTTCCCAGAGTATTATTCCACAGGTGATAATGTTTTTGGTGCTGAAGGCAGCACATGGATCTCATCAAATGGTAACGGTGAATGTAAGAATGACCGTTACCAAATTGGTTCTTTGCCATTGTCAACTTGTCATCTTTTAGGATATAACAAAGAACTTCTGAAACAGACAATACTCAAGCACGAAGCCATATTTAGGGATCAAATTCACGAGCTTCACCGCATTTACCAGAAACAAAGGGAATTAATGGATGAAATTAAAAGGATTGAGTTACATAAACATAGTTTAAGGTTGGAGACACCATCATCAAGTTCCTCTTTGTACTACTCACAAAGCTTGCCTTGGTTGACTAGTCAATCATCTGTTATAAATGCTGAAGGCAACCAGTTGCCATTAGCTTCTGTGCAAGAAAGGAGCAGGCAACTATGTCCTACTCATGCTTCAGCTCCAACTTCAATCAAAGAGTCTTTAAAAGATCCTAAATTATCAGTGTCGACTTTCAGAAAAGTTGGTAAGAAATTATTGGATCTTCAACTTCCAGCTGATGAGTACATTGATAGTGAAGGTGAATCTTGTGAGAATGAAAGGGTTATCAAAGAGCCCCCATTGTCAACTTATACTTTAAATGGAATTTCTAAGGTTGTCTATAGCACTGATGTAAAACAATATGGAACCATTTTTAATGGTTTTTCTGACTTAAATTTACCATTTAAGCTTGAAGAAGAGACAGGTGTGAAGTCTGATGATTTTGGTGCCTCAATCCATCACAGAAACTATACCTTTCATGATATGCCTGGGAGAATGACACTCGGCTCTCATAGTTTTCCGAATGATGTCATCCAGAATTTGAAAAGAAAACAGAATCTTGAATCTTGCTCAGATTCCCCACTACCAAACCAGGGGGAAAAGCATGGACTGCTGCCTATTGGTTCTAGTGCCGGGAAAAATGACAGCAACTTGGATTCTCTTGCTAAATTTAATGATATTGAATCCGTAAGTAAGAAGCTGAAACAAGTTAACAATTGTCCATGTTTTCATTCGATGCATCAAATTGTCCCAAGACCTAGGACCGAGGACCCTGCAGGAACTCATGATCCCACCACTGGTGCCTGGCTTGAACCAAGCTATACTTCATGCACATGTGCTCCTGGTCAGCTTGTTTCTGAGCCTGATATGAAAAGTTCAGGGATTTCTCCATCAATGTTATGGAAAAGTAGTACATCTGGCCCTAATTTAGATGGTCAAAACTATCTTCTCAACAGCAGCTTTTGCAGCAGGTCCAATCCGGTGGATCTGCTATCGATTAGTACTGATGATCTAAACAGTTTTGACAACCGTGGTTCATCATCAGCTGGCCATGAGTTTAGGAAGTGTGTCAAGGATTCGGAATATGTGGGGACAACCAAGAACATAAACCTGAATATTATGCCTGCTGGTTTTTCTGATACAACTGCTGCAGCATTTCAAAGCATTCGAATTGCACGTGAAGAAGATAAATTGCAGGATTCAAGATTGCCCTGGCATAAAGCAAAGGTGCCCAAAGGAAAACCCAATGAAGAAAATCAAACCTCAACCCATATTGACTCTTCCCTTATGAATCCTTGTAAGTCTGGGTGTGTACATTCTGATTTGAATTTCTGTAAGGTTGTGAAAAGTGACTTGTGTAGAGACAAGATTCTTGCATTTGACCTAAATGGAAAGCCTCAGGCATCCAAAGTCTTCCAGAGCCTGTCCAAAAATCATTGGATTGAAGAAATTAAGAAGGTATCCAATGTAAATTCACCTTGTGATAGTGATCCTGACACAGGGAAACAGGCACCTGCAGGTATTCTTGACCTAAATTCATGCATGAATGAGGATGAGAATATGCTGATTGATATTGATCTACAAGCACCGGCAAGTCCAGAAAACAAGGAATGTTCTCCACCCAGAGGAGAATCTGATGAAAACCAGCTTGAGATGCCATTGCAATTGGCAGGGAAGGAGGATCCAGAAGCACAAGAAGAGCAAGCCAAAACTGCAGCTGAGGCTTTGTTTTCCATATCAGAAGCTGTGGCCAATAATGTTACAACTTGTCCATCATCTGAATCTTTTGTAAGTAGTTCTCTCCACTGGTTTGCTGGAATTGTTTCTACAGTAGTGGATCATTCAGAGAGTGTGGTCAAGATGGATTTCAATTGTACCATTAAGGATCTTGAGGACTTTCTGCCGGCTGACTTTGATTACTTTGAGTTCATGTCCTTAAATTTGCCCGACACAAAGGACCTAGATTACTGCTACAAGAGCAGTGACCAAAATGAGCAAGAAGGTGGATCTACTTCACCAACTCAACCGAGAAAGTGTCGGGCAAATAGGAGGCGACGAGGGAACAACTTCCAAAGTGAAATTCTCCCTAGCCTTGCTTCTTTGTCGCGGTATGAGGTGACTGAAGATCTTCAAACCATCGGAAGTCTTGTGGAAGCTTCCAAAACTCACTCAGCAACAGGTTGCCTGAGAAGTGCAGGCAGAAATGTATTGGCTAGGGGGAAGAGAAGGTCTTGTGCTGCAGCCTCTAACATCACACACTTGCTGTTGAATTTGAAGCAGCTAAATATTAACACTGAGATTGGAGATGCAATGACTTCTAGTTATCTCTTTGTTTGTAGCATTTTGGATCACTTGCCTCCTTAA 2712 0.4104 MALLGMSANMRCNGYFPEYYSTGDNVFGAEGSTWISSNGNGECKNDRYQIGSLPLSTCHLLGYNKELLKQTILKHEAIFRDQIHELHRIYQKQRELMDEIKRIELHKHSLRLETPSSSSSLYYSQSLPWLTSQSSVINAEGNQLPLASVQERSRQLCPTHASAPTSIKESLKDPKLSVSTFRKVGKKLLDLQLPADEYIDSEGESCENERVIKEPPLSTYTLNGISKVVYSTDVKQYGTIFNGFSDLNLPFKLEEETGVKSDDFGASIHHRNYTFHDMPGRMTLGSHSFPNDVIQNLKRKQNLESCSDSPLPNQGEKHGLLPIGSSAGKNDSNLDSLAKFNDIESVSKKLKQVNNCPCFHSMHQIVPRPRTEDPAGTHDPTTGAWLEPSYTSCTCAPGQLVSEPDMKSSGISPSMLWKSSTSGPNLDGQNYLLNSSFCSRSNPVDLLSISTDDLNSFDNRGSSSAGHEFRKCVKDSEYVGTTKNINLNIMPAGFSDTTAAAFQSIRIAREEDKLQDSRLPWHKAKVPKGKPNEENQTSTHIDSSLMNPCKSGCVHSDLNFCKVVKSDLCRDKILAFDLNGKPQASKVFQSLSKNHWIEEIKKVSNVNSPCDSDPDTGKQAPAGILDLNSCMNEDENMLIDIDLQAPASPENKECSPPRGESDENQLEMPLQLAGKEDPEAQEEQAKTAAEALFSISEAVANNVTTCPSSESFVSSSLHWFAGIVSTVVDHSESVVKMDFNCTIKDLEDFLPADFDYFEFMSLNLPDTKDLDYCYKSSDQNEQEGGSTSPTQPRKCRANRRRRGNNFQSEILPSLASLSRYEVTEDLQTIGSLVEASKTHSATGCLRSAGRNVLARGKRRSCAAASNITHLLLNLKQLNINTEIGDAMTSSYLFVCSILDHLPP 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00622 903 MobiDBLite consensus disorder prediction 777 793 - -
Cca03g00622 903 PANTHER GB|AAF67766.1 4 884 - -
Cca03g00622 903 Pfam Plant protein of unknown function (DUF863) 628 866 IPR008581 -
Cca03g00622 903 Pfam Plant protein of unknown function (DUF863) 134 358 IPR008581 -
Cca03g00622 903 MobiDBLite consensus disorder prediction 303 327 - -
Cca03g00622 903 PANTHER - 4 884 - -
Cca03g00622 903 MobiDBLite consensus disorder prediction 776 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00622 Cca-Chr3 10929668 10933972 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00622 - - gmx:102666418 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00622 03 10929668 10933972 Cca03g00622 03 10929668 10933972 ECH