Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00603 ATTCGATATGCTTATGAGTTGCTGACAAATCCTTTATGGAAAAGAGACTATGACATATTTGGTATTGATGAACAACTTCATGTTGTTGAGAGTGCCAGCAAGCGTTATGCAGGAAAACGTGTTTCAGAATTGGACTTCCCTTTACTACAGGCCCCTTCTGGATCTATAGATCATCCTTCTAAAGTCATTACTGCTAGTGACTTCCAGTATATATTTCCAGAtgcaaagccatggctaattcagTTGTATTCATCAGGGAGCGAACGTTGTGCTCAATTTTCCGAGTCATGGAATAAGATTGCTTCTTTGTTGGATCCGGTTGCAAACATTGGTATGGTGGAGCTTGGTGAGAAGGAGCATGCCATATTCCTTGCTGATAGAAGATCAACAGGCAAGCCATTTTTTAGAAATGGAATTCCATCTCTTGTTGCCATTCCTGCTGGATGTCGAGCTACTAAATGTATTAATAGGTTTGTTGGTGAGCTTACTGTTGACAAGGTTACAAATTGGTTTGCAACAACTGTATTGGCTTTACCTCAAATTAACTACTACTCAAAGGAAACACTGGTGCCAAATTTTCTCGGTAAAACTAGCCATCATAAGGTAAAAGTAATATTTTTCTCAAAATATGGGGAGCGTGCTGCTCCATTTGTACGACAAGCAGCTAAAGACTATTGGGCTTATGCTTCATTTGCATTCATTCTCTGGCGGGAAGAGGAATCTTCCTATTGGTGGGGAGCATTTGGGGTGGAATCTGCACCTGCTATTGTATTTCTTAAAGACCCAGGTGTCAAACCTGTTGTTCACCATGGTTCAGTTAACAATTCATTTTTTTTTAACATGATGGAAAATAATAAACAGCAAGAGCTTCTGCAACTAAGGAGTGTGACATCAATGGAGCTAGGCTGTGATCCTCAAGGCTATTCTCGTGCTGGTTATGATACAGTTATATGGTATTGTGCTGTCGCAGTAGGAAGGCCAAGTCTGGAGTTGAACAAAATGCGTGAAACTATGTGCAGGGTCCAAGAAACATTGTCTAAGCATAGCCAGGAGGATACATTGTCTGAAAATCAATCCTTTGCTCCAGCTGTGGATGCATTTAAGAGAAGCCGGTTGACATTTGCTTGGCTTGATGGTGAAAAACAGAAGGATTACTGCCAATTTTACCTTGGTCATGCGGCTAGCGATCACACTTGTGGGCAACGACGGGATATGACTGATATTCCTCGGCTATTTGTTATTCGTTTCCTGAGGAATAGTAGTGCTGTTGATTTGAGAACACAAGAAAAGACAACGTGGAAATCATTACTCGTCCAAGATCTAATGAATGATTCTGATCTGGCAGGCCAGTTTGTAGCTGGGTACAAGGGAGAAAATGATGTTTCACAGATAATCCACTGGCTTGCAAATATTATAGCGGATGGTGACTCCAGAGACTTGCCATTCTTTACACTACGAACTCCTAAGCTTGTTCCGGATGACACAGAACCTATTTGGTCCAAAACTGCACAGAGTTTTCCTTTGAAAAATCTGAAGCAAAGTATTCTGAGTGGTCTTAGTGGACTCTCTGTGCACCTTGAGGATCCAAGAGTTGGCCCCTTTTTGCTTCTAGGTGCATTAATTTCTTTGGGTACCATCTGGCTGCGAAGGAACCAACAAGTTCAGCCATTCAAACCAAGTCAACCTAGTTCCAATCAGCCATCTGAATCAAACCAACCTAGTTCCAAGACATCATCCCAGGATGAAAGAAAACAGAAACCAAGAGACCGGCTCCGGAGTCGGCCAAATAAAAAAGCACCCCCTTCTATGACAGATTTGGAGCCATCGGATGCTTACCAGATGCCACTATCAGATTCTGAATCTGAGTAG 1869 0.4152 IRYAYELLTNPLWKRDYDIFGIDEQLHVVESASKRYAGKRVSELDFPLLQAPSGSIDHPSKVITASDFQYIFPDAKPWLIQLYSSGSERCAQFSESWNKIASLLDPVANIGMVELGEKEHAIFLADRRSTGKPFFRNGIPSLVAIPAGCRATKCINRFVGELTVDKVTNWFATTVLALPQINYYSKETLVPNFLGKTSHHKVKVIFFSKYGERAAPFVRQAAKDYWAYASFAFILWREEESSYWWGAFGVESAPAIVFLKDPGVKPVVHHGSVNNSFFFNMMENNKQQELLQLRSVTSMELGCDPQGYSRAGYDTVIWYCAVAVGRPSLELNKMRETMCRVQETLSKHSQEDTLSENQSFAPAVDAFKRSRLTFAWLDGEKQKDYCQFYLGHAASDHTCGQRRDMTDIPRLFVIRFLRNSSAVDLRTQEKTTWKSLLVQDLMNDSDLAGQFVAGYKGENDVSQIIHWLANIIADGDSRDLPFFTLRTPKLVPDDTEPIWSKTAQSFPLKNLKQSILSGLSGLSVHLEDPRVGPFLLLGALISLGTIWLRRNQQVQPFKPSQPSSNQPSESNQPSSKTSSQDERKQKPRDRLRSRPNKKAPPSMTDLEPSDAYQMPLSDSESE 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00603 622 SUPERFAMILY Thioredoxin-like 52 172 IPR036249 -
Cca03g00603 622 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 1 621 - -
Cca03g00603 622 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 1 621 - -
Cca03g00603 622 MobiDBLite consensus disorder prediction 554 578 - -
Cca03g00603 622 Gene3D Glutaredoxin 57 177 - -
Cca03g00603 622 MobiDBLite consensus disorder prediction 554 622 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00603 - - gmx:100820244 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00603 03 10506575 10524388 Cca03g00603 03 10506575 10524388 ECH