Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00596 ATGGATTCGGTTATGGGCCTGGTGGATCTGGAGAAGCACTTCGCCTTCTACGGCGCCTACCACAGCAACGAGGTGAACGTTGCCATCCACACCGTCTTCGTCTGGCCCATTCTCTTCACGGCCCAAATCCTCCTCCACTTCACCCCTCCCCTCCTCACGCTAGGGTTCTTTCCCCTCAACCTCTGCTTCTTCTCCACCCTCTTCTACGCCCTCTTCTACATCGCTATGGATCGCAGAGCCGGTTCCCTCGCCGCTTCCCTCACCTTCTTCTGCTACTTCCTCTCCAGCTTCGTCGCCGATTCCCTCTCCTTTTCCCTCGCTTGGAAGgttgtgttgCCTGCTCAATTGCTTTGTTGGACTGGACAGTTTATTGGTCATGGTGTGTTTGAGAAACGTGCACCGGCTCTGTTGGACAACCTTGTGCAAGCTTTTCTGATGGCGCCTTTCTTCGTCTTGCTTGAGGCCCTACAATCATGTGTTGGATATGAACCGTATCCGGGATTCAATACAAAGGTGAAGGCAAGGATAGATGCTGATATCAAACAGTGGCAGGAAAAGAAACAAAAGAAGCATTCTTAG 579 0.513 MDSVMGLVDLEKHFAFYGAYHSNEVNVAIHTVFVWPILFTAQILLHFTPPLLTLGFFPLNLCFFSTLFYALFYIAMDRRAGSLAASLTFFCYFLSSFVADSLSFSLAWKVVLPAQLLCWTGQFIGHGVFEKRAPALLDNLVQAFLMAPFFVLLEALQSCVGYEPYPGFNTKVKARIDADIKQWQEKKQKKHS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00596 192 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 9 158 IPR009305 -
Cca03g00596 192 PANTHER YGL010W-LIKE PROTEIN 5 189 - -
Cca03g00596 192 PANTHER DUF962 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_8G05310) 5 189 IPR009305 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00596 Cca-Chr3 10340746 10342196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00596 - - gmx:100499802 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00596 03 10340746 10342196 Cca03g00596 03 10340746 10342196 ECH