Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00594 ATGGCATGTTCCTTGAAGAGTGTTTCCTGTGTTCCTGAAATGAAAGGAGTTTTGGTGCCTTGTCCCTCAAAAACTAGCAAAGCAAAATCATGGGGTGGTTCTGTTTTGAGTAATGCTTTCATGGGTGAATCCATTACTCTTGATGAAAAAGCCTCAGGGTATTGCAGTTCAAAAACCTCCACCAATGTCCCTTTTCATGCACAATCAACAATTTGTGTCAGCAAGGCTTTGAAGTGGTGGAAGAAGAGTCTGAAGCCTAACATGGTTGAGATCCATTCAGCACAAGAACTGGTCCAGTCATTGCTCAACGCTGGTGATTCATTGGTTGTGGTTCATTTCTTTTCACCTGGTTGTGGAGGTTGCAAGGCCCTTCATCCTAAGATCTGTCAAATAGCGGAATTGTACCCAAATGCAATATTTGTGAAAGTCAATTACGAGGAACTGAAAACCATGTGTCACGCTTTGCGAATTCACGTGCTACCCTTCTTCAGGTTCTATAGAGGCGCGGAGGGACGAGTTTGTAGCTTCAGCTGTACCAATGCAACTATCAAGAAATTTAAGGATGCCTTGACAAAGCATGGGAATGAACGGTGTGGTTTTGGACCAGCAAAGGGTTTGGACGAATCCGAATTGAAAATTTTGGCTTCTGTTGGTGAAATATCAGTTAATTCTTCTCAGTTACCATGTCCCAAGCAAGGGAAATTTGAAGATTTGGTCACGGAGAGCCACGATTTTTCTGGGGTTTGGAACATGGCAAGTAATAATAGCAGGatatacaaatatgaagtggaagtctctaaaaaattcagagtatga 816 0.4069 MACSLKSVSCVPEMKGVLVPCPSKTSKAKSWGGSVLSNAFMGESITLDEKASGYCSSKTSTNVPFHAQSTICVSKALKWWKKSLKPNMVEIHSAQELVQSLLNAGDSLVVVHFFSPGCGGCKALHPKICQIAELYPNAIFVKVNYEELKTMCHALRIHVLPFFRFYRGAEGRVCSFSCTNATIKKFKDALTKHGNERCGFGPAKGLDESELKILASVGEISVNSSQLPCPKQGKFEDLVTESHDFSGVWNMASNNSRIYKYEVEVSKKFRV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00594 271 SUPERFAMILY Thioredoxin-like 78 194 IPR036249 -
Cca03g00594 271 PANTHER THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC 25 254 - -
Cca03g00594 271 Gene3D Glutaredoxin 79 195 - -
Cca03g00594 271 PANTHER THIOREDOXIN, MITOCHONDRIAL 25 254 - -
Cca03g00594 271 Pfam Thioredoxin 99 172 IPR013766 -
Cca03g00594 271 CDD TRX_family 104 170 - -
Cca03g00594 271 ProSiteProfiles Thioredoxin domain profile. 57 219 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00594 Cca-Chr3 10311184 10314095 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00594 - - gmx:100801871 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00594 03 10311184 10314095 Cca03g00594 03 10311184 10314095 ECH