Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00583 ATGGCAGAAGACACCGTGCCGGAAGTCATCGATCCCATCACCGCCGTGGATATGGAAGTCGAGAGCGAGCCAACCCTGAAGCGTGCTAGGGAGGAAGAGGAGTCCCACGACCGCCCCGACGACGACGTTTCGAAGAAGCAGAAGCTCGACGAGGAAAAGTCCGTCGAAGAACAACGTTTGGAGAGGGAAACAATAGaagaaaaggaaaaggaagcagagaaagaagaagaaaaagaagaagagaaggaaGCAAGTGGTGCTGTGAACTTGGGACACAAGAGCTTTGGCTCTTCATCGGAGATGTTCCATTACTTCTACAACTTTCTTCATACCTGGCCTCAATATCTTAATGTTAACAAGTATGAACATCTGATGTTGTTGGAGTTGCTTAAGAACGGCCATGCAGAGCCTGATAAGAAGATTGGTGGAGGGGTTCGTGCTTTCCAAGTACGCAAGCATCCTACCTTCAAAAGTAGGTGCTTTTTCCTCATCAGGGAAGATGAGTCTGTCGATGATTTTAGCTTCAGGAAGTGTGTGGATCATATTCTTCCCATGCCAGAAGAGATGCATTTGAAATCTAATGCGAACAAGGCGTCCGGAGGTGGCAGTGGGGGTGGAAAGCATCATGGGCATGGAAAGGGTGGCAGAGGGAGGGGTGGGAGAGGAGGTGGGCGTGGGAGAGGAGGAAAGTGGAGAAATTAA 702 0.4658 MAEDTVPEVIDPITAVDMEVESEPTLKRAREEEESHDRPDDDVSKKQKLDEEKSVEEQRLERETIEEKEKEAEKEEEKEEEKEASGAVNLGHKSFGSSSEMFHYFYNFLHTWPQYLNVNKYEHLMLLELLKNGHAEPDKKIGGGVRAFQVRKHPTFKSRCFFLIREDESVDDFSFRKCVDHILPMPEEMHLKSNANKASGGGSGGGKHHGHGKGGRGRGGRGGGRGRGGKWRN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00583 233 MobiDBLite consensus disorder prediction 21 87 - -
Cca03g00583 233 Pfam Protein of unknown function (DUF3223) 108 179 - -
Cca03g00583 233 MobiDBLite consensus disorder prediction 1 90 - -
Cca03g00583 233 Coils Coil 46 87 - -
Cca03g00583 233 Gene3D - 84 183 - -
Cca03g00583 233 PANTHER - 21 217 IPR044673 -
Cca03g00583 233 PANTHER PROTEIN EMBRYO DEFECTIVE 514 21 217 - -
Cca03g00583 233 MobiDBLite consensus disorder prediction 209 233 - -
Cca03g00583 233 MobiDBLite consensus disorder prediction 193 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00583 Cca-Chr3 10047040 10048904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00583 - - gmx:100804514 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00583 03 10047040 10048904 Cca03g00583 03 10047040 10048904 ECH