Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00579 ATGGCCATGGCTAAGTTTCTCTCTGTGCTGCTTCTAGCACTCCTTGGCATTTCCATGATCACAACTCAGGTTATGGCAACAGATTCTGCTTATCACTTGGATGGAAGAAATTATGGACCTGGGAGTCTAAGGAGCTCACAGTGCCCCTCTGAATGCTCGAGAAGATGTAGCCAGACACAGTACCACAAACCGTGCATGTTTTTCTGTCAGAAATGCTGCAAAACGTGCTTGTGTGTTCCTCCTGGTTACTATGGCAATAAATCTGTGTGTCCCTGCTACAACAACTGGAAGACCAAGCGTGGAGGACCAAAATGCCCTTGA 321 0.4704 MAMAKFLSVLLLALLGISMITTQVMATDSAYHLDGRNYGPGSLRSSQCPSECSRRCSQTQYHKPCMFFCQKCCKTCLCVPPGYYGNKSVCPCYNNWKTKRGGPKCP 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00579 106 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 106 - -
Cca03g00579 106 Pfam Gibberellin regulated protein 47 106 IPR003854 -
Cca03g00579 106 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00579 Cca-Chr3 10013069 10014477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00579 - - gmx:100805590 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00579 03 10013069 10014477 Cca03g00579 03 10013069 10014477 ECH