Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00529 ATGAGTGAGAAGAAAGAAGAATCAAATATGGTGGCAATTTCGCTTTACAGAGGAAACCTTCACCGAGTAGCGGAAGCGCCTCGTCGATGGCCAATGCCAGGCCCCAGAATCACTCTCAAAGACTTCAAATCCCTCCTCGCTCGTCGTTCCAAGGCACTCTCTCGCCTTCACGCTTCAaaccctaaccctaaccctaaccctaaccctCTCTCCAACGGCTCCCACCCCGCCAATCCCGGCGAAGGCCCTTCCACCGCCTCCCAAGAGCACGAGGATCGCAAAGAAGTGCCGCTCGTCGCCGTCGCTTCCGCCAAGACACCGCTCGCCGAACCTGATTCGCTCAAGAGCGAAGAGCCTTCCGAGAAGGAGAAACCGTCCGTCGGTGTTGCTGCTTCCACGGAGAAACCGAATGAGCCGGTCGTTGACAATGTAGATCTGCTTGACGAAGAGGAGAAGAGGAAAAAGGAAATTGAGGATAAGTTGCAAGGGTTGAATGATAATAAGCATAATCTGGTGCTGGTGTTGAAGCAGATATTGAATGCCGAGGAGGAGTTAAAGAGACGAAGTAGTATGCAAGTGGTTGTGATGCGTGCTCCTTCAGTTCCACTTCAAGGGGATGCAACAAATGATACTGGTTCCATGACCAGGCACATGGTCCCAAGGTTGGGATCAGAGGGAAATCTTGTTGGTGATGTTGATGGTGGTGAAGGGGATGAGTTTGCTAATAACAATACTATGCATTCTCGCCATATGCTTCGGCCAAGTAGCATGTCACCTTCTTCAGAGTCCCCTCTTCGGAGGACCCCCAGCATTCAACAGAATGTGATTTCACATCCTTCTCGAGCAAATTTGGGAGCTGCAGGTAGTCCATCACGCTTTGCTCTCTCAGGTCATCAGGGAAATCCCATGAACCTGCCTTCAGTATCTGTGTCGGGAACTAGTTACATTGCATCATCCCCTTCCCCAGCAGCATCTGGTGGCACTTCTGTTTTCCGAGATGCTCGGCAGCCAAGTCCATGGAAGTAG 1026 0.499 MSEKKEESNMVAISLYRGNLHRVAEAPRRWPMPGPRITLKDFKSLLARRSKALSRLHASNPNPNPNPNPLSNGSHPANPGEGPSTASQEHEDRKEVPLVAVASAKTPLAEPDSLKSEEPSEKEKPSVGVAASTEKPNEPVVDNVDLLDEEEKRKKEIEDKLQGLNDNKHNLVLVLKQILNAEEELKRRSSMQVVVMRAPSVPLQGDATNDTGSMTRHMVPRLGSEGNLVGDVDGGEGDEFANNNTMHSRHMLRPSSMSPSSESPLRRTPSIQQNVISHPSRANLGAAGSPSRFALSGHQGNPMNLPSVSVSGTSYIASSPSPAASGGTSVFRDARQPSPWK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00529 341 MobiDBLite consensus disorder prediction 281 341 - -
Cca03g00529 341 MobiDBLite consensus disorder prediction 241 268 - -
Cca03g00529 341 MobiDBLite consensus disorder prediction 236 268 - -
Cca03g00529 341 MobiDBLite consensus disorder prediction 22 147 - -
Cca03g00529 341 Coils Coil 147 167 - -
Cca03g00529 341 PANTHER TRNA (ILE)-LYSIDINE SYNTHASE 10 96 - -
Cca03g00529 341 PANTHER TRNA (ILE)-LYSIDINE SYNTHASE 117 340 - -
Cca03g00529 341 MobiDBLite consensus disorder prediction 294 326 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00529 - - gmx:100777249 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00529 03 8857029 8860431 Cca03g00529 03 8857029 8860431 ECH