Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00522 ATGGCTGGAGCCTCCCTCCGAGACACCACGGGCTTGAACGAAGACCTCATCGCAAAGGCCTGTGCTTTCGCCTTCAAAGCTCACAAGTCGCCGGAAAAACTCTACCTTTCCGAAAAGCTTAAGATTTCTTCCGAGGCTTCCCATGTTTTCGCCTTCACGGCCTCCTGGGACTCTGCCCAATGGTTCCTCGACAAACCCTTTGGAGAAACTAAGATAGATCTTGCACTCTTCCCTTCGCTTCGAAGTATTGGTAACGATGAAGCTGCTTTAGCCAACCAAGCCTTTGCAAAAGCATTCGACCGCGTGTTTAAAACTACCAACCTTAAATCCGAGGTGAAAAAGGCTATGGGAGAAGGGAAGCAAGTGGTTTTTACGGGGCACTCATCTGGGGCAGCAGTGGCCATTCTGGCAACGTTTTGGGCCTTGGAAGAGTACCTTAACCCAACCAAAACCCAAAACCACAAGCCTCCCTTTTGTGTCACTTTTGGTTCTCCCTTAATTGGCAACCATATATTCTCTCACGCTTCAAGGAGAGAAAATTGGTCTCGCTATTTCATACACTTTGTTTTGAGATATGACATAGTGCCTAGGATTTTGCTTGCTCCCTCCTCTTCCATTGACCAAACTTTTAGCTCAATTCTCCAACTCTTGAACCCCAAGTCCAAAACTTCCACCCAAGATTCAACAAGGGCAAGTGTAGTTTCCGAGTTTTACTCCACCGTGATGAGGAACGCAGCCAGTGTTACAAGCCACGCTGCGTGTATTCTTATGGGAAGCACCAATTTGTTGCTAGAGACAGTGGCGAGTTTTGTTGAGTTGAGCCCTTATAGGCCCTTTGGAACGTATGTTTTCTGCAACGGGAATGGACAGCTGATTGTGGTGAAAAACTCGGATGCTGTTTTGCAACTCTTGTTCCACACTGCGCAGCTAAGCAACTTGGAAGAACTTCCTGAAGTTGCCCACATTACCATATTGCAGCACCTGGCCTATGAAGCTGAATTGGAGGATAGCTTGGGAATGCAGAATGTAGTGTACTTGGAGCAACTTGAGAAACTTCCCTTGTCTGCTGATGGTTCTAATAGTGATGCTGCAACTATTAGCTCAGCCTTGGATGGCCTTGGACTGAGCACAAGAGCAAGGCTGTGTCTAAGAGCATCTGGTGAGTTGGAGAAGCAGAAAGTGAGAAACGAGGGGAAAATCAGCAAGGAGATGAGGGAGAAAGCTGAGGCAAGCATGAGGGAGCTTGAAGCATACAAAACAACATGTGAGGTGCACAAGGGGAAGGGCTACTACGATGCCTTCAAGGTGCAAAAGGAGGGAAACGACTTCCAAGCCAATGTGAAGAGGCTTGTTCTGGCAGGAGTGTGGGATGAGGTGATTGAGATGCTTAAGAGGTATGAACTCCCAGATGAGTTTGAAGGAAAAGCAGAATGGATTCATCTGGGAACCGTTTATCGGCGCCTGGTGGAGCCTCTTGACATCGCCAACTACTATCGGCACTTGAAGAACGAGGACACGGGACCTTACATGGTGAGGGCAAGGCCAAAACGTTATAGGTACACTCAAAGATGGTTGGAGCATGCCAAGAGGGAAGAGCTGAAAGGTGCTGTCACTGAATCCACCTTTTGGGCTGAAGTGGAAGAGCTTTTCTTCTGGATCAATGGCAACAAGAGTTTTGATGATGTTAAGCAAAGAGTTGTGCAGCTTGAGCAAGACATTAGGAAGTGGACTGATAGAGGGGAACTGACCAGAGATACGTTCTTGAAGGATCCTAGCTTTGTCAAGTGGTGGGAAATTCTGCCTCAGGAACACAGGGTCACTTCCTGCATTGCTACTCTTGTTAATGCTGTGACGGGATAG 1860 0.4769 MAGASLRDTTGLNEDLIAKACAFAFKAHKSPEKLYLSEKLKISSEASHVFAFTASWDSAQWFLDKPFGETKIDLALFPSLRSIGNDEAALANQAFAKAFDRVFKTTNLKSEVKKAMGEGKQVVFTGHSSGAAVAILATFWALEEYLNPTKTQNHKPPFCVTFGSPLIGNHIFSHASRRENWSRYFIHFVLRYDIVPRILLAPSSSIDQTFSSILQLLNPKSKTSTQDSTRASVVSEFYSTVMRNAASVTSHAACILMGSTNLLLETVASFVELSPYRPFGTYVFCNGNGQLIVVKNSDAVLQLLFHTAQLSNLEELPEVAHITILQHLAYEAELEDSLGMQNVVYLEQLEKLPLSADGSNSDAATISSALDGLGLSTRARLCLRASGELEKQKVRNEGKISKEMREKAEASMRELEAYKTTCEVHKGKGYYDAFKVQKEGNDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGKAEWIHLGTVYRRLVEPLDIANYYRHLKNEDTGPYMVRARPKRYRYTQRWLEHAKREELKGAVTESTFWAEVEELFFWINGNKSFDDVKQRVVQLEQDIRKWTDRGELTRDTFLKDPSFVKWWEILPQEHRVTSCIATLVNAVTG 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00522 619 Pfam Enhanced disease susceptibility 1 protein EP domain 414 611 IPR041266 -
Cca03g00522 619 Coils Coil 401 421 - -
Cca03g00522 619 Gene3D alpha/beta hydrolase 34 243 IPR029058 -
Cca03g00522 619 PANTHER PROTEIN EDS1-RELATED 1 615 IPR044214 GO:0006952
Cca03g00522 619 Coils Coil 559 579 - -
Cca03g00522 619 Pfam Lipase (class 3) 54 198 IPR002921 GO:0006629
Cca03g00522 619 CDD Lipase_3 95 211 - -
Cca03g00522 619 SUPERFAMILY alpha/beta-Hydrolases 49 202 IPR029058 -
Cca03g00522 619 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00522 Cca-Chr3 8666562 8670122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00522 77 189 Acyl Lipid Metabolism Gene Families AT5G14930 36.283 2.07e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00522 K18875 - gmx:100778851 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00522 03 8666562 8670122 Cca03g00522 03 8666562 8670122 ECH