Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00521 ATGTTGAGGGAGAAGTTCGTTCAATTTTTCACGCGTCTATGTGGTGTTTTCAATGCTTTTGAGGATGACATGGCACCACTCAGCCCAAATGAAGAAGATCCACCATTAGGATTGGGAGGAAAACTTATCAAGATGACTTGTGCTCTGGCCTTCAAAGCTCACAAATCACCAAAGAAGTTTTACCTTCTTAAAAAGATTGGAAGTTCTCCTTCAGATGTTAATCTTATTTTTAGTTTTCCAGGATCATGGGATGCCTCTGATTGGTTTGTTAGAAAACCTTTTGGGGTAACTAAAATAAATCTTGCATTGTTTCCTTCACTTAGAAGTATTGGTAATGATGAGGCTGCTTTGGTAAATGAAGCATTTCTGCTGAGATTTGAATCCATTTTAAGCAATTCATCTCTTAAGTCTGAGGTAAATGAAGCAATACAAAAAGGGTACCAGATAGTATTTACAGGGCACTCTTCTGGTGCTGCAATGGCCATTCTTGCAACATTTTGGGCCTTGGAAGAGCACCTTAACCCAACCAAAATCCAAAATCACAAGCCTCCATTTTGTGTCACTTTTGGGTCTCCCTTAATTGGCAACCATATATTCTCTCATGCTTCAAGGAGAGAAAATTGGTCTCGCTTTTTCGTACACTTTGTTATGAGATTTGACATAGTGCCTAGGATTTTGCTTGCTCCCTTCTCTTCTATTGACCAAACTTTTGGCTCAATTCTCCAATTCTTGAACTCCGAGTCCAAAACTTCCACCCAAGATTCAACAAGGGCTAGTTTAATTTCTGAATTTTACTCAACCGTGATGAGAAACACAGCTATTGTGACAAATCATGCTGCGTGTAATCTCATGGGCAACACAAATTTGTTAATGGAGAATGTGTCGAATTTTGTTGCCTTGAGCCCTTATAGGCCATTTGGAACTTACATTTTCTGCAACAGAAATGGACACATGATTGTGATAAGAAACTCTGATGTTGTTTTGCAACTCATGTTTCACACTGCTCAGACAAACAATTTGACAGAAAATTCTGAAGTTGCCCACAAAAGCATGCAAGAACATCTAGCCTATCAAGCTAAATTGCAAGAAAGCTTGGAACTGCTGAATTTAGTATACTTAGACCAACTTGAGGAACTTCCCTTGTCTGTTGATGGTTCTAATAGTGATATTGCCACAGTTAGCACTACTTTGGATGGCCTTGAATTGAGCACAAAGGCTAGACTGTGTGTTCGAGCAGCTGGTGAGTTGGAAAAGGAAAAAATCAGAAATGAGGGGAAAATCAATATGAGAAAAGTTCTAGAAAGCATGGAGAAAGTAGAAGAATACAGAGCAGCATGTGAGAGTGAGACAACAAAACATGGTTATTATGATGCCTTCAAGATGCAAGATGAGTTAAGGGACTTTAGAGCAAATGTGACAAGGCTAGACCTAGCCGGTGTGTGGGATGAGATCATAGAAAAGCTAAGAAGTTATGAACTTCCAGATGAATTTGAAGGGAAGAAAAAATGGGTTGATCTTGGAACAAGGTTTAGGCAACTAGTGGAGCCTCTAGATATTGCAAACTATTATCGACATGCAAGGCATTACGAGGATGATGCTTCTTCTTACATGGTTAAGGGAAGGCCAAAACGTTATAGGTACCCTCAAAGGTGGTTGGAACATGCTGAGAGAAGACCACAAGAAGTTATCTCAGAATCTTGTTTTTGGGGTGAGGTGGAGGATATTTGCTACATAACCAGTAATGGGAATAGATCGTTTGAAGATGTTAAGGAAAGGGTTGAGAGATTAGAGGCTCAGATAAAAGCATGGAGTGAAAAAGGGTATTTGGCTAAGGATGTCTTCTTGGAAGGTTCTACCTTGGTAAAGTGGTGGAAGGCACTACCTTCACATCACAAGAAACAATCATGCATTAGAAGGCTCATCGAAACTGGCTTTGAATCTTCTCTGCCCTTAATTAAAAATAAGAAATAA 1971 0.3947 MLREKFVQFFTRLCGVFNAFEDDMAPLSPNEEDPPLGLGGKLIKMTCALAFKAHKSPKKFYLLKKIGSSPSDVNLIFSFPGSWDASDWFVRKPFGVTKINLALFPSLRSIGNDEAALVNEAFLLRFESILSNSSLKSEVNEAIQKGYQIVFTGHSSGAAMAILATFWALEEHLNPTKIQNHKPPFCVTFGSPLIGNHIFSHASRRENWSRFFVHFVMRFDIVPRILLAPFSSIDQTFGSILQFLNSESKTSTQDSTRASLISEFYSTVMRNTAIVTNHAACNLMGNTNLLMENVSNFVALSPYRPFGTYIFCNRNGHMIVIRNSDVVLQLMFHTAQTNNLTENSEVAHKSMQEHLAYQAKLQESLELLNLVYLDQLEELPLSVDGSNSDIATVSTTLDGLELSTKARLCVRAAGELEKEKIRNEGKINMRKVLESMEKVEEYRAACESETTKHGYYDAFKMQDELRDFRANVTRLDLAGVWDEIIEKLRSYELPDEFEGKKKWVDLGTRFRQLVEPLDIANYYRHARHYEDDASSYMVKGRPKRYRYPQRWLEHAERRPQEVISESCFWGEVEDICYITSNGNRSFEDVKERVERLEAQIKAWSEKGYLAKDVFLEGSTLVKWWKALPSHHKKQSCIRRLIETGFESSLPLIKNKK 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00521 656 SUPERFAMILY alpha/beta-Hydrolases 53 245 IPR029058 -
Cca03g00521 656 CDD Lipase_3 75 238 - -
Cca03g00521 656 Coils Coil 586 606 - -
Cca03g00521 656 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 36 642 - -
Cca03g00521 656 PANTHER PROTEIN EDS1-RELATED 36 642 IPR044214 GO:0006952
Cca03g00521 656 Gene3D alpha/beta hydrolase 44 364 IPR029058 -
Cca03g00521 656 Pfam Enhanced disease susceptibility 1 protein EP domain 438 639 IPR041266 -
Cca03g00521 656 Pfam Lipase (class 3) 77 226 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00521 Cca-Chr3 8659401 8661820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00521 104 239 Acyl Lipid Metabolism Gene Families AT5G14930 31.618 2.05e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00521 K18875 - gmx:100820237 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00521 03 8659401 8661820 Cca03g00521 03 8659401 8661820 ECH