Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00520 ATGATGAGAAGAGAATTTATTGAGAAGGCTTGTGTTGTGTCTTTGAAGGCTCACAAGTCACCAGATAAGCCTTACCTTGTTGAAAAGATCAGCAGAAGCGAAGTTATCATCTGCTTTCCAGGATCAGATGCTGTCAGGGATTGGTATTCTCAGACAAACTTTGGTCAAACCAAAATCAATCTCGATCTCTTTCCCCCCCTCAGAAGCATTGGTAATGATGAACCAGCTTTGGTCAATGAAGCCTTTCTAAAAAGATTCCAAGCTATTTTGCTCAAACCAGCACTTCCAGCTGAGGTGAAGAAAGCATTGAGTAAAAATAAGCAAATAGTGTTCGCAGGACACTCCTCTGGTGCTCCAGTGGCCATTCTAGCAACCCTTTGGGCCTTGGAAAACTACCAAACTCCAAAAAACCAATTTGGTATCCCTCCTAAATGTGTAACATTTGGTTCTCCCTTAGTTGGGAATCACATATTTTCCCATGCCACAAGACGAGAAAATTGGTCACACTACTTCTTTCATTATGTGATGAGATATGACATAGTGCCACGAATCCTCCTTGCACCCAAATCCAATTCTCTCATCAGTGAACCAATTTCACAGTCCTTCAACCCCAAATCCAAAGATTTCATGAGTGAATCAGTTGGAAGAACCAATGCAAAGGCAACATCAGATTTCTACGTTGCCATAATGTCAAATGCTGCAACTGTCACAAACTATGCTGCTAGCAAGTTAATGGGCAGCACAGACACCACACTGCAAACTCTGGCAAATTTTATTCCCTTAAGCCCTTATAGACCCTTTGGTACTTACATTTTCTGCACTGGAAATGGAAAGTTAGGAAAGCAAATTGTGATAAATAATCCAGAAGCAGTTCTGCAGGTACTGTTTTTCTCTGCTCAATTAAGCACCGAAGAAACAGAAGCTGCTCAAATTCCCTTTAGAAGCCTACGAGATCATGCGATTTATAGCACCGAACTTCAACAAATGGGAACGCAGAGTGTTGTGAACTTGGATCAACTCGACAAGATTCCTTTGTCTGAAGATGCTGCAGGTGGCTCTGTTTCAACCTTTAACGTAGCCTTAAATGACCTTGGCCTGAGCCCAAGAGCAAGACTGTGCCTTCGTGCAGCAGCAGAGTTGGAGGCAAGGAGATGTGACAACGAGAACAAACTGAATCAGAAGAAAGGCTTTGTTGAGGAAAAAATGAAGGAGCTTCAGAAATACAGAGAATTATGGGAGCATCAGAAAAAGGGTTTCTACGACGGCTTCAGGGAGCACAAGAAAGCCGAAGATTTCAAAGCAAACGTGACAAGGCTAGACCTGGCAAGTGTGTTTGATGAGATGATAGAAAAGCTAAGAAGTTACGAACTCCCAGATGAGTTCGAAGGGAAGAAAGAATGGATTGATCTTGGAACAAGGTTTAGGCAACTAGTGGAGCCTCTAGATGTTGCAAACTATTATCGCCATGCAAGGCATTACGAGGATGATCATTCTTCTTACATGGTTAAGGGAGGAAGGCCAAGCCGTTATAGGTACCCTCAAAGGTGGTTGGAACATGCTGAGAGAAGACCACATCAAGTTATCTCAGAATCTTGTTTCTGGGGTGAGGTGGAGGAAATTGGGTACAAGACAAGTAACGGTAATGGGTCGTTTGAGGATGTTAAGGAGAGGGTTGAGAGATTAGAGACTCAGATCAAAGGATGGAGTGTGACAGGGGTTTTGGCTAAGGATGTTTTGTTGGAGGGTTCTACCTTTGTCAAGTGGTGGAAAGCTTTGCCTCAACATCACAAGGAACAATCATGCATTAGAAATCTTATTTGA 1821 0.4278 MMRREFIEKACVVSLKAHKSPDKPYLVEKISRSEVIICFPGSDAVRDWYSQTNFGQTKINLDLFPPLRSIGNDEPALVNEAFLKRFQAILLKPALPAEVKKALSKNKQIVFAGHSSGAPVAILATLWALENYQTPKNQFGIPPKCVTFGSPLVGNHIFSHATRRENWSHYFFHYVMRYDIVPRILLAPKSNSLISEPISQSFNPKSKDFMSESVGRTNAKATSDFYVAIMSNAATVTNYAASKLMGSTDTTLQTLANFIPLSPYRPFGTYIFCTGNGKLGKQIVINNPEAVLQVLFFSAQLSTEETEAAQIPFRSLRDHAIYSTELQQMGTQSVVNLDQLDKIPLSEDAAGGSVSTFNVALNDLGLSPRARLCLRAAAELEARRCDNENKLNQKKGFVEEKMKELQKYRELWEHQKKGFYDGFREHKKAEDFKANVTRLDLASVFDEMIEKLRSYELPDEFEGKKEWIDLGTRFRQLVEPLDVANYYRHARHYEDDHSSYMVKGGRPSRYRYPQRWLEHAERRPHQVISESCFWGEVEEIGYKTSNGNGSFEDVKERVERLETQIKGWSVTGVLAKDVLLEGSTFVKWWKALPQHHKEQSCIRNLI 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00520 606 PANTHER PROTEIN EDS1-RELATED 2 605 - -
Cca03g00520 606 Pfam Enhanced disease susceptibility 1 protein EP domain 403 604 IPR041266 -
Cca03g00520 606 SUPERFAMILY alpha/beta-Hydrolases 25 188 IPR029058 -
Cca03g00520 606 Pfam Lipase (class 3) 37 184 IPR002921 GO:0006629
Cca03g00520 606 PANTHER PROTEIN EDS1-RELATED 2 605 IPR044214 GO:0006952
Cca03g00520 606 CDD Lipase_3 25 184 - -
Cca03g00520 606 Gene3D alpha/beta hydrolase 12 233 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00520 Cca-Chr3 8637963 8643966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00520 79 185 Acyl Lipid Metabolism Gene Families AT3G07400 37.615 2.26e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00520 K18875 - gmx:100819703 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00520 03 8637963 8643966 Cca03g00520 03 8637963 8643966 ECH