Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00516 ATGGCAAATCGCTGGCTCAGGCCCGAGGTCTATCCTCTGTTCGCCGCGGTTGGTGTTGCTGTTGGAATCTGTGGTTTCCAACTGGTTCGTAACATCTGCATCAACCCCGAAGTCAGGGTGAGCAAAGAGGGAAGAAAGGCTGGAGTGTTGGAGAACTTTGCTGAGGGAGAGAAGTATGCAGAGCATTTCCTGAGGAAGTATGTCCGCAACAGACAACCAGAGATTATGCCCAACATCAACAACTTCTTCGCTGACACAAGTCGAAGCTAA 270 0.5037 MANRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKEGRKAGVLENFAEGEKYAEHFLRKYVRNRQPEIMPNINNFFADTSRS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00516 89 Pfam NADH-ubiquinone reductase complex 1 MLRQ subunit 7 74 IPR010530 -
Cca03g00516 89 PANTHER G-BOX BINDING PROTEIN 2 86 - -
Cca03g00516 89 PANTHER OS07G0274700 PROTEIN 2 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00516 Cca-Chr3 8590009 8596176 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00516 - - gmx:100500534 175.252