Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00511 ATGAAGAATCCATTTCCCGCTATTTTTctcatcctcatcctctccttcgcttcatccACCGCCGCCGATTCCATTTCCCGCCTTATTCAAATCCAGGACCGCGAGAGAGCTTCTCCTTCCGTCCAGGAAgccgccgcgcgcgccgtcctccgccgcctgctgccgTCTCACTCCTCCAGCTTCCACTTCCGGATCAAGCAATGCGGTGGCGAATACTGCTTCATGATCAAAAACCATCCTTCTTTCACGACACCGGGGGATCCTCAAATACTGATTGAAGGCACAACCGGAGTGGACATTGTGGCTGGTCTACACTGGTATTTGAAGCATTGGTGCGGTTCACACATATCATGGGACAAAACCGGTGGCTCGCAACTATTCTCCGTGCCCAATGCGGGGTTTCTCCCGCGCGTTCACCACGCTGGGGTTTCTGTTCAGAGGACTGTTCCATGGAGCTATTACCAAAACGCTGTTACGTCCAGCTATTCCTTCGCTTGGTGGGACTGGCAAAGATGGGAAAGGGAAATTGACTGGATGGCTCTGCAGGGTGTAAACTTGCCACTTGCATTTACGGGGCAAGAGGCTATTTGGCAGAAAGTGTTCCAGGAGAAATTTAACATGAGCATTTCTGATTTGGATGACTTCTTTGGAGGCCCCGCATTTCTTGCATGGTCACGCATGGGGAATTTACATGGATGGGGTGGACCACTGCCACAAAGCTGGTTTGATCAACAGTTAATCTTACAGAAGAAAATTCTTAACAGAATGTATGAGCTTGGAATGACACCAGTCTTGCCAGCTTTTTCTGGAAATGTACCTGCTGCGCTGAAATATATATTTCCATCAGCAAAAATAACACGCTTGGGAAATTGGTTTTCTGTCAAGAATGACCTCAAATGGTGCTGCACCTATCTTCTTGATGCAACTGATTCTTTGTTCATCGAGATTGGGAAAGCATTCATTGAGAAACAACTGCAAGAGTATGGAAGAACCAGCCACATTTACAACTGTGATACTTTTGATGAGAACACCCCGCCCATTGATGATCCTGAGTACATTTCATCATTAGGTGCAGCAACTTTTAAAGGAATGCAGAGTGGTGATGATGATGCTGTGTGGCTGATGCAGGGATGGCTATTTTCATATGACCCATTCTGGAGACCTCCTCAAATGAAGGCCCTTTTACATTCTGTTCCTGTTGGAAAGCTGGTGGTTCTTGACCTGTTTGCTGAAGTAAAACCCATTTGGGTTACCTCAGAACAGTTTTATGGAGTTCCCTACATCTGGAAAGTTGGAGTTGGAATGTCTATGGAAGGTATAGAACAGAATCCCATTGTCTATGATTTGATGTCTGAAATGGCATTTCAAGACAAGAAAATTGATGTTAAGGCATGGGTTGATGTGTATTCAACTAGACGATATGGACAGCCACTTCCTTTAATACAAGAGGGATGGAATGTCTTGTATCACACCATTTACAATTGCACTGATGGAGCCTATGACAAGAACAGAGATGTCATCGTAGCATTCCCAGATGTTGACCCTTCCTTAATTTCATTACAGCATGAGCGATCTCGCCAATATGACAAGCCTAAATCACGAACAATTATCAAGGAAATAACTGATCAATTTGAGACACCACATTTGTGGTATTCAACTTCCAAAGTAATTTACGCATTGAAGCTATTTATAACAAGTGGAGATGAACTTTCAAGATGTAATACTTATAGGTATGACCTGGTTGATCTGACTAGACAAGTCTTGGCAAAATACGCAAATGAATTGTTCTTTAAGGTTGTAGAGGCATACCAATCACATGATGTCCATGGAATGACCCTCCTCAGCCAGAGATTTCTGGACCTAGTGGAAGATTTGGACACTCTGTTGGCTTGCCATGATGGGTTTCTTCTAGGACCTTGGTTAGAAAGTGCAAAGCAACTAGCTCAAAATGAAGAACAAGAGAGACAGTTTGAGTGGAATGCTAGAACACAAATCACCATGTGGTTTGACAACTCAGTAGAGGAAGCCAGTCTGCTTCGTGACTATGGAAACAAGTACTGGAGCGGGCTTCTACATGATTACTATGGTCCCAGAGCTGCCATTTATTTTAAATATTTAAGAGAAAGCTTGGAGCAAGGTGAAGATTTCAAGCTATTGGAATGGAGGAGGGAGTGGATTAAGCTTACTAATGGATGGCAAAGCCGTAGGAATATTTTTCCAGTGGAAAGTAGGGGAGATGCTCTGAATACTTCTCGGTGGCTCTTTAACAAATACCTGGACCCGAGCAATCCTGAAACAAAGCTTATACTGGAATACTGA 2319 0.4226 MKNPFPAIFLILILSFASSTAADSISRLIQIQDRERASPSVQEAAARAVLRRLLPSHSSSFHFRIKQCGGEYCFMIKNHPSFTTPGDPQILIEGTTGVDIVAGLHWYLKHWCGSHISWDKTGGSQLFSVPNAGFLPRVHHAGVSVQRTVPWSYYQNAVTSSYSFAWWDWQRWEREIDWMALQGVNLPLAFTGQEAIWQKVFQEKFNMSISDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILNRMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDSLFIEIGKAFIEKQLQEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAATFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWVTSEQFYGVPYIWKVGVGMSMEGIEQNPIVYDLMSEMAFQDKKIDVKAWVDVYSTRRYGQPLPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISLQHERSRQYDKPKSRTIIKEITDQFETPHLWYSTSKVIYALKLFITSGDELSRCNTYRYDLVDLTRQVLAKYANELFFKVVEAYQSHDVHGMTLLSQRFLDLVEDLDTLLACHDGFLLGPWLESAKQLAQNEEQERQFEWNARTQITMWFDNSVEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLRESLEQGEDFKLLEWRREWIKLTNGWQSRRNIFPVESRGDALNTSRWLFNKYLDPSNPETKLILEY 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00511 772 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 38 760 - -
Cca03g00511 772 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 465 757 IPR024732 -
Cca03g00511 772 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 38 760 IPR007781 -
Cca03g00511 772 Gene3D - 13 141 IPR029018 -
Cca03g00511 772 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 44 132 IPR024240 -
Cca03g00511 772 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 153 430 IPR024733 -
Cca03g00511 772 Gene3D - 459 767 - -
Cca03g00511 772 Gene3D Glycosidases 431 457 - -
Cca03g00511 772 Gene3D Glycosidases 148 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00511 Cca-Chr3 8512386 8522439 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00511 K01205 - gmx:100791160 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00511 03 8512386 8522439 Cca03g00511 03 8512386 8522439 ECH