Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g00509 | ATGAAGGGTGTAGGGAGCAAATTTCTGGAAATTGACTTGATGGTTACTCATCTTCGTTCTTTACCTCCCTTAGTGACAGCGAGACGGTTAGGGCAGAGTTGCACACACTCAAGCGAAGCAATGGCATGGAGAGGACATCTTTCAAAAAACATAAAAGAGCTTCGGTTTTTGATGTGCCAGTCATCACCTGCAAGCTCATCTGCAAGGGCATTTGTGGAAAGAAATTATAAGGAGCTAAAGACATTGAACCCAAAATTGCCAATATTAATTCGTGAGTGCAGTGGAGTTGAACCTCAATTATGGGCAAGATATGATTTGGGTGTTGAGAAAGGCATCAAATTGGAAGGCTTGTCAGAGGCACAGATCTTTAAGGCACTTGAAGATCTGGTAAAAGCAGGATAG | 402 | 0.4254 | MKGVGSKFLEIDLMVTHLRSLPPLVTARRLGQSCTHSSEAMAWRGHLSKNIKELRFLMCQSSPASSSARAFVERNYKELKTLNPKLPILIRECSGVEPQLWARYDLGVEKGIKLEGLSEAQIFKALEDLVKAG | 133 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g00509 | 133 | Gene3D | Glutaredoxin | 36 | 132 | - | - | |
| Cca03g00509 | 133 | PANTHER | NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT | 41 | 133 | IPR016464 | - | |
| Cca03g00509 | 133 | Pfam | Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain | 68 | 118 | IPR007741 | - | |
| Cca03g00509 | 133 | SUPERFAMILY | Thioredoxin-like | 50 | 131 | IPR036249 | - | |
| Cca03g00509 | 133 | SMART | L51_S25_CI_B8_2 | 60 | 133 | IPR007741 | - | |
| Cca03g00509 | 133 | PANTHER | BNAANNG07980D PROTEIN | 41 | 133 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g00509 | K03946 | - | gmx:100306515 | 181.8 |