Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00495 ATGGAACTTCGTTGGCTTCCATTGCTTTGTTCTCTCAATCTGATACTGATGACAGCTCAAGCTGCCATACCTCCACAAGTTTACTGGGAAAGGATGCTTCCAAATACCCCTATGCCCAAACCAATCATAGAACTTCTAAACCTTGAAAAAATTCAATCACAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAAATTCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAAATTCCTTGGTATGGCGCTAAAAAGATTCAATCACAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCAATCTCAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAACTTCCTTGGTATGGCGCTAAAAAGATTCAATCACAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAACTTCCTTGGTATGGCGCTAAAAAGATTCAATCACAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAACTTCCTTGGTATGGCGCTAAAAAGATTCAATCACAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAACTTCCTTGGTATGGCGCTAAAAAGATTCAATCACAAGATGAAATCCCTTGGTATGGCACTGAAAAGATTCGATCTCAAGATGAAATCCCTTGGTATGGCGCTGAAAAGATTCGATCTCAAGATGAATTCCCTTTATATGGTGCTGAAAAGATTCGATCACAAGATGAATTCCCTTTATATGCTCTTCTTCCAAAGGTAAACCTTGTTGCTAATCATCATCACCATGACAACCTAAAACCCGATCTAGTCTTCTTTGAGGAAGGATTGAAGCCTGGCATGAAATTAGAAGGACACTTCTATAAAAGAACTTATACAACTCCATTGTTGGCTCGCCAAATTGCAGAACGTATACCATTCTCTCCAGAAAAGACAAAAGAAATATTGGAGATTCTTTTTGTGAATCCAAAGCCTAAGAATGTTGAGATTGTGAAGAAAGCCACTAGTCGGTGTCAAGCACCTGCAATGATTGGAGAAGAAAAACATTGTGCAACTTCACTAGAATCCATGGTGGATTTCATCACTTCTAAGCTTGGGAAGAACATCCATGTTGTTTCTACAGAGGTGGAAAAGGAAACAATGTCCACAAAATTCTTAGTGAAAAATGGAGTGAAGAAGTTAGCAGAAGATAAGATCATTGTTTGTCATCCTATGAATTACCCTTATGTTGTCTTTTTTTGTCACGAGGTACTAAATACTACTGCACATTTTATGCCTTTGGAAGGAGAAGATGGTACTAGAGTTAAAGCTGTAGCTGTGTGCCACAAAGACACATCAGAATGGAATCCAAAGCATATTTTTTTCCAGATGCTTAAAATCAAGCCTGGAACTACTCCAGTGTGTCACATGTTCCCTGAGGGCCACCTTCTTTGGTTTGCCAAATAG 1638 0.398 MELRWLPLLCSLNLILMTAQAAIPPQVYWERMLPNTPMPKPIIELLNLEKIQSQDEIPWYGAEKIRSQDEIPWYGAEKIRSQDEIPWYGAKKIQSQDEIPWYGAEKIQSQDEIPWYGAEKIRSQDELPWYGAKKIQSQDEIPWYGAEKIRSQDEIPWYGAEKIRSQDELPWYGAKKIQSQDEIPWYGAEKIRSQDEIPWYGAEKIRSQDELPWYGAKKIQSQDEIPWYGAEKIRSQDEIPWYGAEKIRSQDELPWYGAKKIQSQDEIPWYGTEKIRSQDEIPWYGAEKIRSQDEFPLYGAEKIRSQDEFPLYALLPKVNLVANHHHHDNLKPDLVFFEEGLKPGMKLEGHFYKRTYTTPLLARQIAERIPFSPEKTKEILEILFVNPKPKNVEIVKKATSRCQAPAMIGEEKHCATSLESMVDFITSKLGKNIHVVSTEVEKETMSTKFLVKNGVKKLAEDKIIVCHPMNYPYVVFFCHEVLNTTAHFMPLEGEDGTRVKAVAVCHKDTSEWNPKHIFFQMLKIKPGTTPVCHMFPEGHLLWFAK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00495 545 Pfam BURP domain 335 543 IPR004873 -
Cca03g00495 545 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 17 543 IPR044816 -
Cca03g00495 545 ProSiteProfiles BURP domain profile. 335 545 IPR004873 -
Cca03g00495 545 PANTHER BURP DOMAIN PROTEIN RD22 17 543 - -
Cca03g00495 545 SMART BURP_2 333 545 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00495 Cca-Chr3 8100073 8109145 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00495 - - gmx:100786660 608.986