Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00479 ATGGTGGTGGCGATGGCGGGTGTGTCCCAAGCCATCTCCATCTCAATCTCCACTTCATCCTTCGATTTCCACCCCAAGAAACCACCCTCTTCCTCCCTCTTGGGCCTGGCCCACTCCTCCCAGCCCAATCTCTCAATCTCCTCCAGAAGGAACCGCAACAACACCACCCTCTGTTGCCGCTGCACCCTCAATTCCGACGATACCTCTCACAATTGGGATTGGAACCGTTGGTGTCGCCACTTCTCCGAAATCGAACAAGCCGAGAATTTCGCCTCTGTCCTCAAGTTTCAACTTGATGATGCTATTGAGAAGGAGGACTTTCAGGAAGCGGTTAAGCTGAAGAGGGCTATAGCGGAAGCAACGTCCAAGGACACTGTTGCTGAAATTTTGTCCCTTTTGAAGAGTGCTATAGATGATGAGCGATACCATGATGCTTCAAGATTATGTAAAAACACTGGAAGTGGACTGGTTGGTTGGTGGGTAGGGTACTCAAAAACTTCAGATGACCCTTTTGGTAGAATTATTCATATAAGTCCTGGTATGGGTAGATTCATTGGCAAGAGCTACAGTCCAAGACAGTTGATCACAGCATCTACTGGGACTCCAATTTTTGAAATTTATGTGGTAAAAAAAGAAGATGACACCTATCACATGCAGGTAGTGTATTTGCGACAAGCCAAAGGAAAGTCAAGGAAAAACCCTCCATCTATACCTGCTAAAGGCCCATCCAAACCTGAGGTGGAGAATGCATCTTCAGTCGAGGTGGATGAACATGAAGAGAAGGTTGAGAGAAATGATGAGAAAAATAGTAATATCGAGGGAGCAACTGAGGAGGGTATTAAAAGTGTCATTAATTTTCTTAAAGAAAAAATTCCAGGATTGAAAGTCAAAGTTATGAATGTTAATGTTGAAGAGGAAGCAACAGAGGATAATGAGGAAGATAGTAATAAAACAGGCTCCAGTGAGAATCATGAAGAGGTAGTTAATAATCTGGATGAACCTGATGGGGTCACTTTAGAAAGAGATGGTGATGCCACAGAAGAAGAAAAGGATTTGGACATGAAGCTTTTTATTGGTGGGGTTGTACACAACAATGAAGATACTCCTGTCAAGGATGAATTTATACGTCTTCCAGCTGTAATAAACAATATGGAAAAGGATTCTTTTGTCTTTCATTTTTCTAGTAAAAATCTAGATTATGGTATTAAAGATGATAAAGTTCCCGATATCAAAGTGGCAGCTCTAGCAGCACAAGGAGTATCAGAGCTTATGCCTCCTGATGTTGCTAAGGCATTTTGGAGTTCTGACAAAGTCTCTTCTAAGGTCTCAAAAAGCATGCGTGAAATTGTAAAACTTGCTATTAGTCAAGCACAGAAAAGAACTAGATTATCTGGGGATACACATTTTAGTCGGATTACCTCTCCAAAAGGGGATTTTGATCCTTTTGATGGACTCTACTATGGTGCATTTGGCCCTTATGGCATTGAAATAGTGCAATTGAAGCGAAAATTTGGACATTGGAATGATGTGGACAATGAAAACAACACTTCAGATGTGGGATTCTTTGAATATGTAGAGGCTGTGAAGTTAACTGGGGATCTTAATGTTCCTGCTGGCCAGGTGACATTCCGTGCTAAAATTGGCAGAGGCAATCGCACCTCCAACCGTGGGATGTATCCTGATGAATTAGGAGTGGTTGCTAGTTATAAAGGCCAGGGGAGAATAGCTGATTATGGTTTTCGAAATCCGAAATGGGTCGATGGAGAACTGCTCCAACTTAATGGCAAGGGCATGGGACCATACATGAAAGGTGCAGACCTCGGTTTCCTTTATGTTGTGCCTGAGCAAAGTTTTCTTGTGTTGTTCAACCGGTTGAAACTACCCGAGTGA 1890 0.427 MVVAMAGVSQAISISISTSSFDFHPKKPPSSSLLGLAHSSQPNLSISSRRNRNNTTLCCRCTLNSDDTSHNWDWNRWCRHFSEIEQAENFASVLKFQLDDAIEKEDFQEAVKLKRAIAEATSKDTVAEILSLLKSAIDDERYHDASRLCKNTGSGLVGWWVGYSKTSDDPFGRIIHISPGMGRFIGKSYSPRQLITASTGTPIFEIYVVKKEDDTYHMQVVYLRQAKGKSRKNPPSIPAKGPSKPEVENASSVEVDEHEEKVERNDEKNSNIEGATEEGIKSVINFLKEKIPGLKVKVMNVNVEEEATEDNEEDSNKTGSSENHEEVVNNLDEPDGVTLERDGDATEEEKDLDMKLFIGGVVHNNEDTPVKDEFIRLPAVINNMEKDSFVFHFSSKNLDYGIKDDKVPDIKVAALAAQGVSELMPPDVAKAFWSSDKVSSKVSKSMREIVKLAISQAQKRTRLSGDTHFSRITSPKGDFDPFDGLYYGAFGPYGIEIVQLKRKFGHWNDVDNENNTSDVGFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRTSNRGMYPDELGVVASYKGQGRIADYGFRNPKWVDGELLQLNGKGMGPYMKGADLGFLYVVPEQSFLVLFNRLKLPE 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00479 629 MobiDBLite consensus disorder prediction 250 274 - -
Cca03g00479 629 Coils Coil 255 278 - -
Cca03g00479 629 MobiDBLite consensus disorder prediction 305 348 - -
Cca03g00479 629 PANTHER PROTEIN EXECUTER 2, CHLOROPLASTIC 53 629 - -
Cca03g00479 629 MobiDBLite consensus disorder prediction 227 274 - -
Cca03g00479 629 Pfam Cyclin D1 binding domain 469 627 - -
Cca03g00479 629 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 53 629 IPR044680 GO:0010343
Cca03g00479 629 MobiDBLite consensus disorder prediction 313 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00479 Cca-Chr3 7707065 7716922 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00479 - - gmx:100786321 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00479 03 7707065 7716922 Cca03g00479 03 7707065 7716922 ECH