Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00475 ATGCTtatatatataattagttgttatatatatatgtatgaatatgaatatgataAGATCACAAGAAATATAACTATGGCAAAGCAATCATCTGAGTTGGCCATTGAAGACCTCAAGAAGCTTCTCAGAGAGAAGGAGGAACTTGATGGTGTGGCAGCTGCAAAAGTTGAAGAGCTTATAGCTGAGTTGCAGGGACGTTATCTGCGTCCATTTGACCATGCTGTGCAAAGAATTATTGACGGATTTACTTACTTCAAGATCAACAATTTCGACCAAAACCCGGATCTGTATGCCCAACTTGCTAATGGTCAAAGCCCCGAGTATCTGGTGTTTGCTTGCTCTGACTCTCGAGTGAGTCCCTCTACTATCCTTAACTTCCAACCTGGAGAAGCTTTCATGGTCCGCAACATTGCTAACATGGTCCCTCCATTTAATCAGCTTAGGTACAGTGGAGTTGGTGCAGCCATTGAGTATGCTATCACAGATCTTAAGGTGCCAAACATCTTGGTCATTGGACATAGTCGCTGTGGCGGAATTAAAAGGCTTATGAGTCATCCAGAGGATGGTTCTGCTCCTTTTGACTTCATAGATGATTGGGTGAAAATTGGTTTGCCTGCCAAACTCAAGGTTCTGAAAGAATATAATGGCTACGATTTCAAAGAACAATGCAAATTCTGTGAAAAGGAGTCAGTGAATAACTCCTTAGTGAACTTGAAGACATATCCATATGTTGAAACAGGAATAAGAAACAAGAGCATAGCACTGTTGGGGGGTTACTATGATTTTGTGAAGGGAGAATTCAAAGTTTGGAAGTATGAGACTGACTTCACTGAACCCATTACCATCCCTCCTTTTACCCATTAG 864 0.3993 MLIYIISCYIYMYEYEYDKITRNITMAKQSSELAIEDLKKLLREKEELDGVAAAKVEELIAELQGRYLRPFDHAVQRIIDGFTYFKINNFDQNPDLYAQLANGQSPEYLVFACSDSRVSPSTILNFQPGEAFMVRNIANMVPPFNQLRYSGVGAAIEYAITDLKVPNILVIGHSRCGGIKRLMSHPEDGSAPFDFIDDWVKIGLPAKLKVLKEYNGYDFKEQCKFCEKESVNNSLVNLKTYPYVETGIRNKSIALLGGYYDFVKGEFKVWKYETDFTEPITIPPFTH 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00475 287 CDD beta_CA_cladeB 81 270 IPR045066 GO:0004089|GO:0008270
Cca03g00475 287 PANTHER CARBONIC ANHYDRASE 25 282 - -
Cca03g00475 287 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 157 177 IPR015892 GO:0004089|GO:0008270|GO:0015976
Cca03g00475 287 SMART Pro_CA_2 101 271 IPR001765 GO:0004089|GO:0008270
Cca03g00475 287 Coils Coil 28 48 - -
Cca03g00475 287 Gene3D Carbonic anhydrase 69 282 IPR036874 GO:0004089|GO:0008270
Cca03g00475 287 Pfam Carbonic anhydrase 108 266 IPR001765 GO:0004089|GO:0008270
Cca03g00475 287 PANTHER CARBONIC ANHYDRASE 25 282 IPR001765 GO:0004089|GO:0008270
Cca03g00475 287 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 113 120 IPR015892 GO:0004089|GO:0008270|GO:0015976
Cca03g00475 287 SUPERFAMILY beta-carbonic anhydrase, cab 60 280 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00475 Cca-Chr3 7645175 7649270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00475 K01673 - gmx:547671 450.669