Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00458 ATGGCGCAGCCTCTCTTCACTCCCTTCACTCCTCCCATTCCCTCCCTCAACCTCCAACCACGCCGTTTCGTTTCCCGCCCAATTCCTCTCCTCTCTCACACCACCACCGCCATTTCCGCCGCTAACCTCGCCGTTTCGCCCAATGCACCTACCTCCCTTCGCTCCCTCACCGAGGATTACGAAACGCGGTGGCAGCTGATTGAGTCGCTAATCGGCGGCGTCGATTTATCGGAGGAGGAATCCGAGGCGTGTCTCGACTTGCTGCTGAACGAGGCCAACGAGGCGTTGATTAGCGCCGTTCTCGTGCTTCTCAGAGCCAAGGGAGAGACTTATGAAGAAGTTGTGGGGTTGGCGAGGGCGATGCTCAAGCATGCGACGAAGGTTGAGGGTTTGGTCGATGTGGTTGACATTGTGGGAACCGGAGGGGACGGTGCCAACACGGTTAATATTTCAACCGGGGCTTCGATTCTCGCGGCGGCGTGCGGTGCCAAAGTTGCCAAGCAAGGGAACCGTTCCAGTTCTTCTGCGTGTGGAAGTGCTGACGTGTTAGAAGCATTGGGAGTGGTTATTGACTTGGGTCCTCAGGGGGTAAAGAAGTGTGTGAATGAAGCTGGAATTGGGTTTATGATGTCTCCAAAGTATCACCAGGCAATGAAGATTGTTAGGCCCGTAAGAAAGAAGCTAAAGATAAAAACTGTATTCAATATATTGGGTCCAATGTTGAATCCAGCACAGGCACCTTATGCGGTTGTTGGAGTATACACTGAGGACTTGGTCTTCAAAATGGCTAAAGCACTCAATAGATTTGGCATGAAAAGAGCTTTAGTTGTCCACTCTGAAGGTTTGGATGAAATGAGTCCTCTTGGACCTGGTTTAGTGCTTGATGTTACTCCAGACAGGATTGATAAGTTCTCATTTGATCCCTTGGAGTTTGGCATTCCTCGGTGTAATATTGAAAACTTAAAAGGTGGTGGCCCAGAATACAATGCAGAGGTTCTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCTATTGCAGATGCTTTAATTCTCAATGCAGCAGCAGCTCTCTTGGTCAGTGGCCGTGTAAGGAACCTAGCTGAAGGGGTATCTGTGGCGCGCGAAACACAACAATCAGGAAAGTCTCTCAAAACTCTCAACCAGTGGAAGGATATCTCAAATAAATTCAAAGATGATGTGGGCATGGATGCCTGA 1212 0.5008 MAQPLFTPFTPPIPSLNLQPRRFVSRPIPLLSHTTTAISAANLAVSPNAPTSLRSLTEDYETRWQLIESLIGGVDLSEEESEACLDLLLNEANEALISAVLVLLRAKGETYEEVVGLARAMLKHATKVEGLVDVVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGNRSSSSACGSADVLEALGVVIDLGPQGVKKCVNEAGIGFMMSPKYHQAMKIVRPVRKKLKIKTVFNILGPMLNPAQAPYAVVGVYTEDLVFKMAKALNRFGMKRALVVHSEGLDEMSPLGPGLVLDVTPDRIDKFSFDPLEFGIPRCNIENLKGGGPEYNAEVLKRVLGGERGPIADALILNAAAALLVSGRVRNLAEGVSVARETQQSGKSLKTLNQWKDISNKFKDDVGMDA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00458 403 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 65 128 - -
Cca03g00458 403 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 64 128 IPR036320 -
Cca03g00458 403 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 52 401 IPR005940 GO:0000162|GO:0004048
Cca03g00458 403 TIGRFAM trpD: anthranilate phosphoribosyltransferase 68 389 IPR005940 GO:0000162|GO:0004048
Cca03g00458 403 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 133 389 IPR035902 -
Cca03g00458 403 Hamap Anthranilate phosphoribosyltransferase [trpD]. 65 391 IPR005940 GO:0000162|GO:0004048
Cca03g00458 403 Pfam Glycosyl transferase family, a/b domain 133 381 IPR000312 GO:0016757
Cca03g00458 403 Pfam Glycosyl transferase family, helical bundle domain 66 125 IPR017459 -
Cca03g00458 403 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 52 401 - -
Cca03g00458 403 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 129 400 IPR035902 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00458 K00766 - gmx:100794615 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00458 03 7196304 7201618 Cca03g00458 03 7196304 7201618 ECH