Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00454 ATGGACAAGAACTTCTGCACTGACCTTGCTGGCAACAGCTTTATGAGAATGCCAAATTCAAGTGTTTATATACACATTGATAGAAGAAAGGTTTATGTCAACATCAGGAGTCGTGTACCAGAAAAGCTACTTCAACTCAACAGTGAAACTAGAACAGTACAGGCAACTAATGACTATGACAGGCTAAAGATATATTTGTACTTCTCAGCTCCAGTGCTGAATTCATCTACAGAAATTTTGAAATCTCTCAACATTAGTCAGGGTTCACTTCTTCCAACTAATGCAAAAAGTCTTGCAAATCGGAGATTTGGATTCATGATTGCTAATATCTCCTCTACAGCTGTAATATCGGTTGACTTCAATTCAGAGTCTATAATGACCAGACAAGGGACTCAAGTTTCTCCAATTGCACCAGTTACTTTCCTTTATGATACTAAGAGGCCTGCAGTGATGTTGAGTACATATAGCATGAGGACAAAAGAACACACTTTCCAGATATTGATTAAATTTGTGAAGCCTGTTTTTGGCTTCAACTCCTCTTGCATATCAATTTCTGGGGGTTTACTAAAAAGTTTCCATACATTAAGAAGGAGCACATACATTGTTGAGTTACAAGCAGATGATGATCTAGTATTTGTAAGTGTTCCCGAGAATGTAACACAAGATGTTGCTGGAAACAAAAATCTAGCTTCCAATTTTCTACAAGTGAGACACTACTCTATGCCCCTGGTTTCTTCTGTGGTTTCTGCATTTGCAACTGCTTCTTTTGTGCTGACATCAATTGCTGCCGGTTTTCTTACCATCTCAACTGCAAGCCTTCAATCTATTGGTACATTTATGAGATCATCATCTTTCTTGGTCGTTGATCCAGCAAGGAATCTTCTTAGAATTTTGAGCCATATTCAGGTGTTTGCACTATCTAGATGGTTAGCAGTTAAGTTGCCAGTTGAGTTTTATGAATTTGCCAGACATTTACAATGGACCATACCCTATTTTCCTGTTCCATGGGAAGATGAACCCATGAACCCGTTCATGGTAGGATCTAGTCCTTTTTGGAGCTCTAAATCCATCACCAAAGCCTCAGCAACTATCCCAAACAAGTTGTTTGACAAGAGTTTGAATTTGGCTGCTTCAGTGTATGGATCACCACTTACTTCTTCAGAGTACCAGCAATACTTCGAGGAAAAAAATATAAAACCGGAAGCTGAATATATTTTGGATTCACAACGATCCTCAGGATGGACAGAATTTTCTAGGAGCATGTTTTGGTTAGCTGTAATCTGTGGTGGTTTAATGGTTCTGCATGCTTTTCTCCTCATTGTCCTGAAATTTGGGAAGAGAAATTCTGAGAAGCATAGAATACACGGAGCACTCACATTCCCAAGATTTGAGATATTTCTTATATTTCTTGCACTACCTAATATTTGCAAGTCCTCTGCTGTCCTTATTCAAGGGGGATCTCCTTCAGGAATCGTAGTTGGCATTCTACTGTTGGTTTTTGTGTGCATTGTGCTTCTATCTTTGTTCATGTTTCTCTCTATTGGCATCACATTTGGAAAACTACTTCAGTACAAGGAAGTTCACCAAGAAGGTGAGACATTTCACTGGTACCAAGAGCTAGTGAGAGTAACTCTAGGGCCGGGAAAAAGAGGTCAATGGACATGGAAAGAACAACCAAAATCTGTGTATCTAACCATCTTTGGTCCACTCTTTGAAGACTTAAGAGGCCCTCCAAAGTACATGCTTTCACAGATATCTGGTAGCAATGGCAATCCTCAAAGTCAAAGAGAACGCATCATTGCCTCTGATGATGAAACAGAAGATGCAGAAGCACCCTTCATCCAAAAGCTGTTTGGAATTCTCAGGATATATTATGTGTTCCTTGAATCCATAAGGCGTGTCTCACTGGGAATTTTGGCAGGACTCTTTGTTCCATCTCAGTATTCTAGGAAACCAGTGATCATCATGCTGTCCATGACCTCTTTTCAGCTATTCTTCATGTTGCTAAAGAAGCCTTTCATAAAGAAAAGGGTTCAGTTGGTTGAGATTATCACTCTCACATGTGAAGTTACTCTATTTGTTACTTGTTTTGTTCTCTTGAAGGAGGACTTTTCTGTGAGAGGTGAGACCAGGTGTGGGGTTTTCATGCTTGTGGTGTTCCTAGTGGGGTATTGTGCACAGATTACTAATGAATGGTATGCTTTATATGTGCAAACAAAGATGCTAGACCCTGAGGAGAAATCACTCTTAACAGGTTTGAAAATTGCTTTCATTGGGTTTCTATTGTACTTCATCCCTCAAAAGTGCATCAAAGAAGACTTGGAAAAGATGTTACCACAAAATGGTAATGGGAAAGAAGAGGCTAGAGTCACTTCTTTGGGGGGTGAGAGATCAAGGGATTCAAGTAGTAGAAGCTCAGGTACACCTGATGGAGCATTTTTGAACAAACTAAGGGAATTTGCAAAGGGTAGCTTTGGAAGGGAAAGAAGTGGAGCTGTGAGTGATCCTTCTACTAGTGGCACTACTGGATGGACTGGATTATGGGGTAACAAAAGGAGTGGAGGCTCATCTTCTGATTACAAGACAAAATCAAGTTCATTGTACAAAGATTTGGAAGCCATTTTTGCTTCCAAGTGA 2637 0.3982 MDKNFCTDLAGNSFMRMPNSSVYIHIDRRKVYVNIRSRVPEKLLQLNSETRTVQATNDYDRLKIYLYFSAPVLNSSTEILKSLNISQGSLLPTNAKSLANRRFGFMIANISSTAVISVDFNSESIMTRQGTQVSPIAPVTFLYDTKRPAVMLSTYSMRTKEHTFQILIKFVKPVFGFNSSCISISGGLLKSFHTLRRSTYIVELQADDDLVFVSVPENVTQDVAGNKNLASNFLQVRHYSMPLVSSVVSAFATASFVLTSIAAGFLTISTASLQSIGTFMRSSSFLVVDPARNLLRILSHIQVFALSRWLAVKLPVEFYEFARHLQWTIPYFPVPWEDEPMNPFMVGSSPFWSSKSITKASATIPNKLFDKSLNLAASVYGSPLTSSEYQQYFEEKNIKPEAEYILDSQRSSGWTEFSRSMFWLAVICGGLMVLHAFLLIVLKFGKRNSEKHRIHGALTFPRFEIFLIFLALPNICKSSAVLIQGGSPSGIVVGILLLVFVCIVLLSLFMFLSIGITFGKLLQYKEVHQEGETFHWYQELVRVTLGPGKRGQWTWKEQPKSVYLTIFGPLFEDLRGPPKYMLSQISGSNGNPQSQRERIIASDDETEDAEAPFIQKLFGILRIYYVFLESIRRVSLGILAGLFVPSQYSRKPVIIMLSMTSFQLFFMLLKKPFIKKRVQLVEIITLTCEVTLFVTCFVLLKEDFSVRGETRCGVFMLVVFLVGYCAQITNEWYALYVQTKMLDPEEKSLLTGLKIAFIGFLLYFIPQKCIKEDLEKMLPQNGNGKEEARVTSLGGERSRDSSSRSSGTPDGAFLNKLREFAKGSFGRERSGAVSDPSTSGTTGWTGLWGNKRSGGSSSDYKTKSSSLYKDLEAIFASK 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00454 878 MobiDBLite consensus disorder prediction 795 810 - -
Cca03g00454 878 MobiDBLite consensus disorder prediction 831 864 - -
Cca03g00454 878 MobiDBLite consensus disorder prediction 781 812 - -
Cca03g00454 878 PANTHER TRANSMEMBRANE PROTEIN 1 878 - -
Cca03g00454 878 MobiDBLite consensus disorder prediction 825 864 - -
Cca03g00454 878 PANTHER - 1 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00454 Cca-Chr3 7153342 7161169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00454 - - gmx:100801150 1446.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00454 03 7153342 7161169 Cca03g00454 03 7153342 7161169 ECH