Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00438 ATGGCATCAATTCGCGACGCCGATATCCATCTTCGGCTACAGAGCTTGGACGCTTTCGCCGCTTCTCACAGAAACTCCCTTCAATCACTCCGAGCCACCGCACTCGAAACCGCTCGATCTCAATCTGAACTTGCGGAGATTAAAGCGAAACTGAGGGAGGCTGAGGATGAATTGGTAAAGGCACTCGCAGTTAAGACTCGGAGAGAGGCGAAGCGAATGGCTCTGAAAGATGCTATTGATTCTGCGAGGGGAAGAGTTGAAGATCTGAAGACAAGTATTCAGAAGCGGAGAACCGAACAGGAAGAGTGTGCCACGGTTGTTTCGCAACACCGTCTTGTTTTGGCAGCATCTGAACAGAAATCAAATGAAAGCATTGAACAAGATGAAGTCCAGGAGGCCATATCTTGGTACAATAGGGTTCTTGGTTTTCATGTTGAAGGTGGACATGGGGTAAAATTCACCTTCAAGAATATTAATGTAGACAACCCAAATGAGGAGTACTTTTTTACCATCCGTCATGAAGATGACACGTATACATTGCTAAATTGTGAACCATCTCTCAAAGATATCGATGAGTTGATCCATGAATTAAACAAGACAAATGGTCTATTTAAATTTGTCAGAACAATGAGGAAAAAGTTTCAAGAAGCAGTGGCACAAGGCAGTCTATCTATGATAACAAATGAACATCAAGAATCTTCCTTTATTTCTGCATCTGCTCCAGTTTTATCAGAATCAACCATTAGAAGTTATTCTCCAACTGAAAGAAATGAGCATCAAGGTGAACCCACCAAAGTTAATGCACGTCTTCAAAAACAAGTCAATTGGAGAAGGGTAAAATCAGCAATTCTATCTCCTGATTCTGCATCATCTGTCCGTCAATCTCCTCGTTTGAAGGCCAGGAAATGA 909 0.4246 MASIRDADIHLRLQSLDAFAASHRNSLQSLRATALETARSQSELAEIKAKLREAEDELVKALAVKTRREAKRMALKDAIDSARGRVEDLKTSIQKRRTEQEECATVVSQHRLVLAASEQKSNESIEQDEVQEAISWYNRVLGFHVEGGHGVKFTFKNINVDNPNEEYFFTIRHEDDTYTLLNCEPSLKDIDELIHELNKTNGLFKFVRTMRKKFQEAVAQGSLSMITNEHQESSFISASAPVLSESTIRSYSPTERNEHQGEPTKVNARLQKQVNWRRVKSAILSPDSASSVRQSPRLKARK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00438 302 Gene3D Chromosome segregation protein Spc25 122 222 - -
Cca03g00438 302 MobiDBLite consensus disorder prediction 247 267 - -
Cca03g00438 302 Pfam Chromosome segregation protein Spc25 147 215 IPR013255 GO:0007059|GO:0031262
Cca03g00438 302 Coils Coil 37 64 - -
Cca03g00438 302 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 8 271 IPR045143 GO:0007059|GO:0031262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00438 K11550 - gmx:100804876 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00438 03 6892040 6897237 Cca03g00438 03 6892040 6897237 ECH