Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00436 ATGGCTTCCCCTTCTCATTTCGACGATGAATTCGATTTCGGAGGCGGATTTAGCGGAAGGCATTCAGGTCATAAGAGGCCGTCTCCTGATTACGACGATGAAGATTACGATAACGATCCGTTTGCGCCGAAGAAGGCTAAATCAAAAGCCGAAGAAGCCTCTGGTGTAGCAACAGGAATGATCTTGTCACTTCGTGAGAGTCTTCAGAGCTGCAAGGATACACTTGCTACATGCCAAAATGAACTTGAGGCTGCGAAATCTGAGATTCAGAGTTGGCATTCTACACTTAAAAATGAGCCTTCTGTACTTGCTGGGATCACTCCAGAGCCCAAGATGTTGATTAATTATCTCAAGACCTTGAAATCCTCTGAAGAGTCTTTAAGAGATCAGCTTGAAAAGGCAAAGAAAAAGGAAGCTGCATTCATTGTAACATTTGCAAAACGAGAACAAGAGATAGCAGAGTTGAAGTCTGCTGTGCGGGATCTGAAAGTGCAACTCAAGCCACCATCAATGCAGGCCAGGAGGTTGTTACTAGATCCTGCTGTTCATGAAGAGTTTACGCGTTTAAAGAATTTAGTCGAGGAGAAGGATAAAAAAGTAAAGGAGTTGCAAGATAACATTGCTGCTGTAAGTTTTACTCCACAAAGCAAGATGGGGAAGATGCTGATGGCTAAATGTAGAACCCTGCAAGAGGAAAATGAGGAGATTGGAAATCAAGCTTCTGAGGGGAAGGTGCTGCGATCTTTGTTTTATGCATCTAATTGTCACTTTTTCCCCATTTGTGTTGTATTACACTTGGTAACAGGATGTATATTAAACTTGCATTCATTGCCCTACTACAAAGATATTCATTGTAACTGA 861 0.4216 MASPSHFDDEFDFGGGFSGRHSGHKRPSPDYDDEDYDNDPFAPKKAKSKAEEASGVATGMILSLRESLQSCKDTLATCQNELEAAKSEIQSWHSTLKNEPSVLAGITPEPKMLINYLKTLKSSEESLRDQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKVQLKPPSMQARRLLLDPAVHEEFTRLKNLVEEKDKKVKELQDNIAAVSFTPQSKMGKMLMAKCRTLQEENEEIGNQASEGKVLRSLFYASNCHFFPICVVLHLVTGCILNLHSLPYYKDIHCN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00436 286 MobiDBLite consensus disorder prediction 1 52 - -
Cca03g00436 286 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 1 245 IPR033757 GO:0000381|GO:0005634|GO:0080009
Cca03g00436 286 Coils Coil 68 95 - -
Cca03g00436 286 Coils Coil 186 206 - -
Cca03g00436 286 Pfam WTAP/Mum2p family 133 245 IPR033757 GO:0000381|GO:0005634|GO:0080009
Cca03g00436 286 Coils Coil 117 140 - -
Cca03g00436 286 Coils Coil 145 165 - -
Cca03g00436 286 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 1 245 - -
Cca03g00436 286 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00436 Cca-Chr3 6852570 6861398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00436 K22824 - gmx:100805415 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00436 03 6852570 6861398 Cca03g00436 03 6852570 6861398 ECH