Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00417 ATGTTACAGTTTCCGGCGTATATGACACAGTACCCATTGTCGACGAGGACCATTCCGACGTCGTTTCTGTTACCCTCTCAGTGGCCTCAGCCCCAAAACGAAGAACTCCTTCTCGCCATGGAGGAGTCTGATTTCGAAGAAAAGTGCAATGAAATCAGGAAGATGAACAGCAACCTTGTTGTGATAGGGAAAACCACTAATGAAAATGATAAGGAAGACTTTGACAATGAGGCAGATGACGATGATGCTGACAATGCAGAGGAATCTGAGGGTGAAGATTTTGAGCAAGAAACTGGTTGA 300 0.45 MLQFPAYMTQYPLSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKMNSNLVVIGKTTNENDKEDFDNEADDDDADNAEESEGEDFEQETG 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00417 99 PANTHER OS02G0593400 PROTEIN 1 99 - -
Cca03g00417 99 PANTHER OS02G0593400 PROTEIN 1 99 - -
Cca03g00417 99 Pfam Anaphase-promoting complex subunit 15 8 97 IPR026182 GO:0005680|GO:0090266
Cca03g00417 99 MobiDBLite consensus disorder prediction 64 99 - -
Cca03g00417 99 MobiDBLite consensus disorder prediction 72 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00417 Cca-Chr3 6448606 6450212 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00417 - - gmx:100803289 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00417 03 6448606 6450212 Cca03g00417 03 6448606 6450212 ECH