Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00414 ATGGAAATTCCAGCATCTGTGAAAAAAAGTGGACACGTGGTGGGCATTCCATACCCAAGTCGAGGACACGTGAACTCCATGTTGAACCTCTGCAAACTACTCGCAAGTGAAAATCCTCTCCTCAAAATCACCTTCGTCGTCACACAAGAGTGGCTCGGCTTCATCCGCTCCGACCCTAAGCCCACCAACATTCGCTTCGCCACCGTCCCCAATGTTATCCCTCTCCAATCCCAGATAGCCTCTGACATCCCCGCTTTCTTCCAAGCCGTTACCACCGAAATGGAACCTCCCTTTCGCCGCCTCCTCCACCGCCTTAACCCTCCTGCCACCGCCCTCGTTGCCGACGTCGAGCTGCGCTTTCCGGTCGCCGTTGCTCGCCGCCAAAATATTCCGGTGGCGCTGCTTTGGACCATGTCGGGGTCCTTTCACCTCAGCTTGCATCGACTACAAAGCTTGGTTCGTAACCACTCTTTGAAGGTTGACCTTTTAGATGATTATGAAGAGCACATACCGGGAATTTCCCCGGCACAATTAGCTGATCTTCGAGTAGTGCTTCGTGAAAATGACTTGAGGTTTTTGCAGCTTGAGTTGGAATGCATTTCTATAGTGCCTAAAGCAGATTGTCTTATTGTTAATACTGTTCAAGAGTTGGAAGCTGAAGTGATTGATTATTTGAGAGCTATGTTCCACTTTCCAATTTATCCCATTGCCTTTCCTTACTTCAAACCCGACGCAAGTCATTTAGGGGCCAACAGCGATCACAACGTTGACTACATAAAGTGGCTACATTCTCAGCCAGCTATGTCAGTATTGTATATTTCTCTTGGTAGTTTCCTTTCTGTGTCTTGTGCCCAAATGAATGAAATCGTTTCAGCTTTAAACACGAGTGGTGTTTCTTACTTTTGGGTGGTTCGTGGAGAAGTTTCCTGGTTAAAAGAGAAATGTGGTGACAGGGGTTTAGTGGTGCCTTGGTGTGACCAATTGAAGGTTTTGTCACATCCTTCTATAGGTGGGTTTTGGAGCCATTGTGGGTGGAATTCCACTCTAGAAGCTGTTTTTGCTGGTGTTCCAATGCTCACGTTCCCTCTTTTCTTTGACCAAGTCCCAAATAGTAGGCAAATTTTGGAAGTGTGGAAGAACGGGTGGGAGTTAAAAAGATCAGAGTTGCGAAGTGAAGAATTGGTAACACAAGAGGAAATAGTGAAAGTGATTAGAGAGTTTATGGATGTTGGAAGTACTAAGGGTAAAGAAGTTCGAGATAGGGCCCTACAACTTAATGGCATATGTGACCGAGCAGTTGCAGAAGGTGGATCCTCCAATATGAACCTAAAAGCATTTATAAAAGAAGTTTTGTGTGTTCAAGATCATTTAGTGTGA 1377 0.4582 MEIPASVKKSGHVVGIPYPSRGHVNSMLNLCKLLASENPLLKITFVVTQEWLGFIRSDPKPTNIRFATVPNVIPLQSQIASDIPAFFQAVTTEMEPPFRRLLHRLNPPATALVADVELRFPVAVARRQNIPVALLWTMSGSFHLSLHRLQSLVRNHSLKVDLLDDYEEHIPGISPAQLADLRVVLRENDLRFLQLELECISIVPKADCLIVNTVQELEAEVIDYLRAMFHFPIYPIAFPYFKPDASHLGANSDHNVDYIKWLHSQPAMSVLYISLGSFLSVSCAQMNEIVSALNTSGVSYFWVVRGEVSWLKEKCGDRGLVVPWCDQLKVLSHPSIGGFWSHCGWNSTLEAVFAGVPMLTFPLFFDQVPNSRQILEVWKNGWELKRSELRSEELVTQEEIVKVIREFMDVGSTKGKEVRDRALQLNGICDRAVAEGGSSNMNLKAFIKEVLCVQDHLV 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00414 458 Gene3D Glycogen Phosphorylase B; 16 443 - -
Cca03g00414 458 PANTHER GLYCOSYLTRANSFERASE 8 450 - -
Cca03g00414 458 Gene3D Glycogen Phosphorylase B; 247 431 - -
Cca03g00414 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 450 - -
Cca03g00414 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 207 397 IPR002213 GO:0008194
Cca03g00414 458 PANTHER UDP-GLYCOSYLTRANSFERASE 87A1-LIKE 8 450 - -
Cca03g00414 458 CDD GT1_Gtf-like 12 425 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00414 Cca-Chr3 6429262 6431346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00414 12 450 Glycosyltransferase AT2G30150 46.742 5.57e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00414 - - vun:114196047 719.924