Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00405 ATGGCGTCGCGAAACGGCGCCACCAGAAAGCTCTCCTTCGAGGTCCTGGGCCGGAGCCTCTCCGCCGACGACGAATCGGATCCAACGACCGAGCGCAGCCGCAAGAAGCGCAAGAACCGCGCCTCCAAGAGGAAAAAGAAGCTTCTCGATCGCGCCCAATCCTTCGATCCGCATTCGGCGCCCTTCCGAAACGGAGAAGCCTGCAACGGATTCGAGCTCAACGCTAGCAGCGTGTGCGCGGTTGCGGCGGCGCGCGAGGAGGATCGTGAGGCTCCGACGGCCGTGCGCGGCGGCATCGAGGGGGTTAATTTTGGCGAATTGAGGCAGAGAAACGTGAGTAGTGCCTCTGAGGATTTGGCGGCTTCGGTGGCGCACGACGAGGGTGGGACTGGGAAGGAGGATGGTGGTGTgagtgcgagtgcgagtgcgagtgcgagtCCGGTGGAGAAAGCGACGAACGAGCCTGATAGGAATGTGGCTACGAAATTGGAGACGGTGGAATCGTTGGACTGGAAGCGTCTCATGGCGGATGATCCGAATTATGTGTTTTCAGTGGACAAGTCTCCTGTAGCATACTTTTTGGAGGAAATGCACAATGGAAATTCTTTACGGAGCACAACCACCCTTGGGAATGAAAAAGAACGAGAGAAAGTTTATGACACTATCTTCCGCTTGCCGTGGAGATGCGAATTGCTTATAGATGTTGGCTTCTTTGTCTGCTTCGATTCATTTCTTTCATTATTAACTGTTATGCCAGCGAGGATCATGATGACTATTTGGAGGCTTCTAAAGACAAGGCAGTTCAAGAGGCTGTCAACAATGGAAATTTCAGATTTTGGCTGTTTTCTTATTATGAGTTCTGGAGTGGTTCTTTTGCAGCGAACAGATATCAGCTTAATATATCACATGATCCGTGGTCAGGGAACAATAAAATTATATGTGGTCTACAATGTTTTAGAGATATTTGACAAATTATGTCAAAGTTTTAATGGGGATGTGTTGCAAACATTATTTCTTTCTGCTGAAGGACTTGCAAATTGCCCCCCAGAAAGTATGAGATTCTGGATTTGGAGATTTGTTTCTGACCAAGCTTTAGCTGTGGCTGCTTCAAATATCCTTCATCTTTCCGTACTTGTTCATTCTTTTATCTTATTAGCTCAGGCAATCACTTTATCAACCTGTATAGTTGCTCACAACAACGCATTGTTAGCTTTGCTGGTGTCCAATAATTTTGCTGAGATCAAAAGCAATGTCTTTAAGCGATACAGCAAGGATAATGTTCACAGTTTAGTTTACTTTGCAGATTCCGTGGAGAGATTCCACATTTCATCATTCATCTTATTCGTTTTGGCTCAAAATATTCTGGAGGCAGAGGGTCCCTGGTTTGAAAGTTTTCTCGTTAATATCCTCTTGGTTTATGTATGCGAAATGATTATTGATATTATCAAGCATTCATTCATTGCTAAATTCAATGACATTAAGCCCATCGCATACTCTGAGTTCCTTGAAGATCTATGTAAACAGACTCTAAATATGCAAACTGAGGGTGCAAAGAAAAACTTGACTTTTGTTCCCCTTGCTCCAGCATGTGTGGTTATTCGAGTTCTTACTCCAGTATATGCTGCAAACCTTCCTCCCAATCCCCTTCCATGGAGGCTTTTCTGGGTGCTTCTTTTCTCAGCAATGACCTATGTTATGCTCACAAGCCTCAAGGTTCTCATTGGCATGGGCCTACAGAAGCATGCATATTGGATTCCTCCTCGTGCCCAAAGAACATTTGCTGAAAGATCACAAGAGATAATTCAGAACACTTGA 1815 0.4474 MASRNGATRKLSFEVLGRSLSADDESDPTTERSRKKRKNRASKRKKKLLDRAQSFDPHSAPFRNGEACNGFELNASSVCAVAAAREEDREAPTAVRGGIEGVNFGELRQRNVSSASEDLAASVAHDEGGTGKEDGGVSASASASASPVEKATNEPDRNVATKLETVESLDWKRLMADDPNYVFSVDKSPVAYFLEEMHNGNSLRSTTTLGNEKEREKVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTVMPARIMMTIWRLLKTRQFKRLSTMEISDFGCFLIMSSGVVLLQRTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLCQSFNGDVLQTLFLSAEGLANCPPESMRFWIWRFVSDQALAVAASNILHLSVLVHSFILLAQAITLSTCIVAHNNALLALLVSNNFAEIKSNVFKRYSKDNVHSLVYFADSVERFHISSFILFVLAQNILEAEGPWFESFLVNILLVYVCEMIIDIIKHSFIAKFNDIKPIAYSEFLEDLCKQTLNMQTEGAKKNLTFVPLAPACVVIRVLTPVYAANLPPNPLPWRLFWVLLFSAMTYVMLTSLKVLIGMGLQKHAYWIPPRAQRTFAERSQEIIQNT 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00405 604 Pfam Eukaryotic membrane protein family 272 583 IPR008010 -
Cca03g00405 604 MobiDBLite consensus disorder prediction 1 67 - -
Cca03g00405 604 MobiDBLite consensus disorder prediction 137 151 - -
Cca03g00405 604 MobiDBLite consensus disorder prediction 118 159 - -
Cca03g00405 604 MobiDBLite consensus disorder prediction 20 34 - -
Cca03g00405 604 PANTHER UNCHARACTERIZED 47 591 IPR008010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00405 Cca-Chr3 6307005 6313872 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00405 - - gmx:100807550 922.539