Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00397 ATGTTCTTCCTCTCTTGCAGAAAAATCATGATCACTATCCTACTTTTCTTGCTTTCTTTTGGATTCAGCAATGGTGCCAATGTGAGATCCTCAGAAGGGAGGATAGGGCAGTGGCAACTGCTCCTTAACAATACTGGCGTGGTTGGCATGCATATGGCTTTAACCTACAAAAACACAGTCATAATGTTTGACCAAACTGGAGCAGGCAAATCCAGTTACCAACTTCGCAGACGGTTCAATGGAAGCAGGTGCACCACAAGCAACCACGATTTGATGGATTCCACATGCTATGCTCATTCTGTGGAGTATGATATCAGTACCAACAAAGTGAGACCTCTGAGGCTTGACACTGATCCTTGGTGCTCCTCAGGTTCATTCCTAAGTAATGGTACACTCTTACAAACCGGTGGATATGAAAGAGGTGCCAAAAGGATCAGACTCTATAGGCCATGTGGGAATCACCAATGTGACTGGATACAATCAAAGAAATCACTATCTGATGAGAGGTGGTATGCTTCGAGTCAGATACTACCAGAACATGATAGAGTGGTGGTTGTTGGAGGAAGAAGAGTTTTCACATATGAATTTGTACCAAAAACTAGTCCCGGAGAAAAATCCTTTGAGCTTCCATTCTTGCACCATACCAATGACAGAAATGCAGGAGGGAACAACCTCTATCCCTTCCTTCACCTCTCATCAGATGGAAACTTGTTCGTCTTCGCCAACCGTGATTCCATCCTACTCAACTTGAGAAGGAACAAAGTGATCAAGACCTTCCCTAGAATTCCAGGACAAGGGTCAAGAAACTACCCTAGCTCAGGCTCATCCGTGTTACTCCCATTGGACCATAGAGACAACTTCACAAAGGCTGAAGTCATGGTGTGTGGAGGTTCATCCACAGGAGCACTTAAAGCTGCTGGTGGGGGAAGATTCTTGCAAGGCTTAAGATCATGTGGTAGGATGGTGATCTCAGGGAACAAACACAAGTGGGATATGGACTACATGCCCCAACCACGTCTCCTACATGACATGCTGATTCTCCCTAATGGTAAAATCTTGATCATAAATGGGGCTAAACAAGGGTGTGCAGGATATGACAATGCTAGAAACGCTTCTCTTGAGCCTTATCTTTATAGCCCTAAAAAAAAACTAGGAAAAAGGTTCACAGTCCTCAAGTCAACCAAGATAGCTAGAATGTATCACTCATCAGCAACTCTTCTTCCTGATGGGAGGGTCTTGGTTGCAGGTGGTAACCCTCATGGGAGGTACACTTTTAACAATGTGGCATACCCAACTGAACTTAGACTTCAAGCATTTGTTCCATACTATATGGAAAGGAGGTACCATAACTTGAGGCCTAGTAACTTGACCATAGAATATGGACATGGTGGTGAGAGCCATGCAATTGGGTATGGGAATGAGTTTAGAGTTAGGTTCTGGCTGGGGAAGGGGCCAAGCAATGAGGTGGGGTTCAGTGCCTATGCACCACCGTTTACCACACATTCCTTTGCGATGAATCAGAGGATGCTGAAGCTGAGGTGCAAGAGCTTGGGGAGAAGTGGTGATGGGTGGGTTGTTGCAGTCTTAGAAGCCCCACCATCACCCCATGTTGCACCTTCTGGTTATTACTTGCTCACGGTTGTGAATGGTGCAATTCCAAGCGTGTCTCTTTGGGTTCAGTTTGCACACGCCTTGGCTTAA 1701 0.4544 MFFLSCRKIMITILLFLLSFGFSNGANVRSSEGRIGQWQLLLNNTGVVGMHMALTYKNTVIMFDQTGAGKSSYQLRRRFNGSRCTTSNHDLMDSTCYAHSVEYDISTNKVRPLRLDTDPWCSSGSFLSNGTLLQTGGYERGAKRIRLYRPCGNHQCDWIQSKKSLSDERWYASSQILPEHDRVVVVGGRRVFTYEFVPKTSPGEKSFELPFLHHTNDRNAGGNNLYPFLHLSSDGNLFVFANRDSILLNLRRNKVIKTFPRIPGQGSRNYPSSGSSVLLPLDHRDNFTKAEVMVCGGSSTGALKAAGGGRFLQGLRSCGRMVISGNKHKWDMDYMPQPRLLHDMLILPNGKILIINGAKQGCAGYDNARNASLEPYLYSPKKKLGKRFTVLKSTKIARMYHSSATLLPDGRVLVAGGNPHGRYTFNNVAYPTELRLQAFVPYYMERRYHNLRPSNLTIEYGHGGESHAIGYGNEFRVRFWLGKGPSNEVGFSAYAPPFTTHSFAMNQRMLKLRCKSLGRSGDGWVVAVLEAPPSPHVAPSGYYLLTVVNGAIPSVSLWVQFAHALA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00397 566 SUPERFAMILY Galactose oxidase, central domain 100 441 IPR011043 -
Cca03g00397 566 SUPERFAMILY E set domains 450 560 IPR014756 -
Cca03g00397 566 CDD E_set_GO_C 469 560 IPR015202 -
Cca03g00397 566 Pfam Galactose oxidase-like, Early set domain 467 560 IPR015202 -
Cca03g00397 566 PANTHER SECRETED PROTEIN-RELATED 12 563 - -
Cca03g00397 566 Gene3D Immunoglobulins 462 564 IPR013783 -
Cca03g00397 566 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 12 563 - -
Cca03g00397 566 Gene3D - 32 450 IPR037293 -
Cca03g00397 566 Pfam Glyoxal oxidase N-terminus 50 297 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00397 Cca-Chr3 6094761 6096844 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00397 - - gmx:100814200 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00397 03 6094761 6096844 Cca03g00397 03 6094761 6096844 ECH