Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00395 ATGACGATCACGGCGGCGCCGGCGCTCAAGGACGGGTGCCTTACGGCCAGGGGCAAGGTGGTTCTGACCCACGTCCCCGGAAACATTGTGCTTTCTCCTCTTGGAACAGCTTCCGCTTTTCTGGGTGCAACTTCGACCATTTCAAGTTCCCGTCACGTTTTCAATCTGGGCATTCTCCAGGGATATAAGTTGCTATGTTTGTTCAGAGAGAAAATCTGGTGGATGATACCACGTATAGGGAGATCTGCAAGTGATGTTCTGATGGAAACTCAATTGCTGCTCCTGGAAGCAAGAGAAGAGTCTGCGCTTGAGGATGAGTTTTCTTCTGACTCCGAAGAGCCAACTACGGAGAACACTTGCTACATTCTCTTCTTGCCTGTTTTGGATGGACAGTTCCGCGCAACTTTGCAAGGAACTCAATCAAATGAGCTTCAGTTCTGCATTGAAAGTGGAGATGCCCACGTTCAAACTTCCCAATCATTTGAAGCAGTATTTGTAAATTCAGGGAACAATCCATTTGAGTTAATCAGGGATTCTATCAAGATATTGGAGAAACACAAAGGAACTTTCTGTCATCTTGAAAACAAGAGTATTCCTGCACATCTTGATTGGTTTGGATGGTGCACTTGGGATGCTTTTTACACCGAAGTAACTCCACAAGGAATAAGAGAGGGCCTTCAAAGTCTCTCAAACGGGGGTTGTTCGCCAAAGTTTATCATCATTGATGATGGATGGCAAGAGACGATCAATACTTTTCAGAAAGAGGGTGAACCAATGATTGAAGGAACCCAGTTTGCAACCAGACTGGTAGACATTAAAGAAAACAAAAAGTTCAACAACGCAGGCTCCGACAATTCTTGTAACAATCTCCACGATTTTGTTGACTCTATCAAACAGAATATGAATGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGTGTACTCCCATCATCAGATGCAATGAAGAAATATAATCCAAAGCTTGCATATCCAATTCAGTCATCTGGTATCACAGGGAACCTTAGAGATATAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATCATCGAACCACAAAATCTGTATGACTTTTACAATGACTATCACAGTTACCTTGCCAGCTGTGGCGTGGATGGAGTCAAAGTAGATGTCCAAAATTTGATAGAAACGTTGGGTTCTGGGTATGGTGGACGTGTTTCATTAACCAAACGTTATCATGAAGCACTAGAGCAATCTGTAACAAGGAACTTTAAGGACAACAACCTCATTTGCTGCATGTCTCACAACTCTGATTCAATTTACAGTTCTAAGAAGAGTGCAGTGGCTAGAGCATCTGAGGATTTCATGCCAAGAGAACCAACATTTCAAACCTTGCACATTGCCTCTGTTGCCTTTAACAGTCTTCTTCTGGGAGAGATATTTGTGCCGGACTGGGACATGTTCCATAGCAAACACGAGACAGCTGAGTTCCATGCTGCAGCAAGAGCAATAAGTGGCTGTGCTGTATATGTTAGTGACAAGCCTGGAAATCATGATTTCAAAATCCTCAAGAAGCTAGTACTACCTGATGGATCCGTCTTGAGAGCAAGATATGCCGGCCGTCCTACTCGAGATTGTTTATTTGAAGACCCTGTAATGGATGGTAAAAGTCTGCTGAAAATTTGGAATTTGAATGTCCTGACTGGGGTTATAGGCATCTTCAATTGCCAAGGAGCAGGAAGCTGGCCACTGAAATCATTAGAAGCCACACCCTTGCGCATAACCATTTCAGGGAAAGTGAGACCCCTTGATGTTGAATTTCTTGAAGAGGTTGCTGGTGATAATTGGAATGGAGATTGCATAGTATATGCCTTCAATGCAGGCTTGCTTTCCAAGGTGTCGACCAGAGGAAAACTAGAAGTGTCCCTAGAGACTCTCCAATGTGAAATATATACAGTATCTCCAATCAGGGTGTTTGGTCATGAAGTGCAATTTGCACCAATAGGGTTGCTTGACATGTACAATTCGGGAGGAGCAGTAGAAGCCCTTGACTGCACCATGGATGTTGCACAGTGCATAATAAAGATCAAAGGTAGAGGGTGTGGCAGTTTTGGAGCCTACTCCAACGTTAGACCGAAACGTTGTCTAGTGAACATGAAGGAGGAGGAGTTCTCCTACAACCCTGAAGATGGATTATTGACCATTAAACTTGGTGGTGAAGGCAATTCAAGGGACATAGAGTTTGTATACTGA 2250 0.4364 MTITAAPALKDGCLTARGKVVLTHVPGNIVLSPLGTASAFLGATSTISSSRHVFNLGILQGYKLLCLFREKIWWMIPRIGRSASDVLMETQLLLLEAREESALEDEFSSDSEEPTTENTCYILFLPVLDGQFRATLQGTQSNELQFCIESGDAHVQTSQSFEAVFVNSGNNPFELIRDSIKILEKHKGTFCHLENKSIPAHLDWFGWCTWDAFYTEVTPQGIREGLQSLSNGGCSPKFIIIDDGWQETINTFQKEGEPMIEGTQFATRLVDIKENKKFNNAGSDNSCNNLHDFVDSIKQNMNVKYVYMWHALAGYWGGVLPSSDAMKKYNPKLAYPIQSSGITGNLRDIAMDSLEKYGVGIIEPQNLYDFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKRYHEALEQSVTRNFKDNNLICCMSHNSDSIYSSKKSAVARASEDFMPREPTFQTLHIASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAISGCAVYVSDKPGNHDFKILKKLVLPDGSVLRARYAGRPTRDCLFEDPVMDGKSLLKIWNLNVLTGVIGIFNCQGAGSWPLKSLEATPLRITISGKVRPLDVEFLEEVAGDNWNGDCIVYAFNAGLLSKVSTRGKLEVSLETLQCEIYTVSPIRVFGHEVQFAPIGLLDMYNSGGAVEALDCTMDVAQCIIKIKGRGCGSFGAYSNVRPKRCLVNMKEEEFSYNPEDGLLTIKLGGEGNSRDIEFVY 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00395 749 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 749 - -
Cca03g00395 749 Gene3D Aldolase class I 200 526 IPR013785 -
Cca03g00395 749 Pfam Raffinose synthase or seed imbibition protein Sip1 9 735 IPR008811 -
Cca03g00395 749 SUPERFAMILY (Trans)glycosidases 200 526 IPR017853 -
Cca03g00395 749 PANTHER - 1 749 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00395 Cca-Chr3 6079950 6084528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00395 1 737 Glycoside Hydrolase AT1G55740 48.800 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00395 - - gmx:100816978 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00395 03 6079950 6084528 Cca03g00395 03 6079950 6084528 ECH