Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00388 ATGGGTGGCGTAACCTCTTCCATGGCGGCCAAGCTCGCCTTCTTCCCTCCGAGTCCGCCGTCCTACAGGCTGCTAAAGGAGGAGGCCACGGGGCTCCTGCTCATGGACCCCTTCCCCCACCGCGAGAACGTCGAGGTCCTCAAGTTCCCCACGCGCCGGGGCTCCGAGATCGTCGCCGTCTACGTCCGCCACCCCATGGCCAAGTTCACCGTCCTCTACTCCCACGGTAATGCCGCCGATGTCGGCCAGATGTACGAGCTCTTCGTCGAACTCAGCATCCACCTCCGCGCCAATCTCATGGGATACGATTACTCTGGCTATGGACAGTCATCAGGGAAGCCAAGTGAGCACAATACTTATGCTGACATTGAAGCTGCATATAAGTATCTTGAAGAGAACTATGGTGCTAAGCAGGAAGACATCATCCTTTATGGTCAATCTGTTGGAAGTGGTCCTACTGTGGATCTTGCTTCCCGTTTGCCTAGACTAAGGGCTGTTGTTCTCCACAGTCCTATACTATCAGGGTTGAGAGTCATGTACCCTGTGAAACGGACATACTGGTTTGACATTTATAAGAACATTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCATGGAACTGCTGATGAGGTTGTTGATTGCTCTCATGGCAAGCAATTGTGGGAGCTATGTCAACAGAAATATGAACCTTTGTGGCTCAAAGGAGGAAATCACTGTAATTTGGAGCTGTATCCAGAATACCTTCGACATCTCAAAAAATTCATATCCTCGGTAGAAAAGCCACCATCACAAAGAGTGAGTTTCAGGAGAAGTGTTGACAGAGTTGAACAATCGAGAGGAAGTACCGATTGCTTTGAAACACCAAGGAAGAGTACTGATCAGAGGGACAAGCCAAGAAAAAGTACTGATAGGACAGATAAACTGAAATTTCATGAATTCAAATTCAACAATACTGAAAAGTTAGAGAAGATAAGAGTCCAATTTGATCAAATGGAGAGGTCACGAAGAAGTGTTGAGTACAGTGATAAATCAAGAAGCATCGAGTTCCAAGATAAATCCAGGAGAAGCGTTGATGTTCAGTTTGAGAGGCCACGGAAGAGCATTGATTGGCTGGATAGAGTTCGAGCTAGCTGA 1143 0.4733 MGGVTSSMAAKLAFFPPSPPSYRLLKEEATGLLLMDPFPHRENVEVLKFPTRRGSEIVAVYVRHPMAKFTVLYSHGNAADVGQMYELFVELSIHLRANLMGYDYSGYGQSSGKPSEHNTYADIEAAYKYLEENYGAKQEDIILYGQSVGSGPTVDLASRLPRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDKIPLVKCPVLVIHGTADEVVDCSHGKQLWELCQQKYEPLWLKGGNHCNLELYPEYLRHLKKFISSVEKPPSQRVSFRRSVDRVEQSRGSTDCFETPRKSTDQRDKPRKSTDRTDKLKFHEFKFNNTEKLEKIRVQFDQMERSRRSVEYSDKSRSIEFQDKSRRSVDVQFERPRKSIDWLDRVRAS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00388 380 Pfam Serine aminopeptidase, S33 68 175 IPR022742 -
Cca03g00388 380 MobiDBLite consensus disorder prediction 289 306 - -
Cca03g00388 380 Gene3D alpha/beta hydrolase 40 259 IPR029058 -
Cca03g00388 380 MobiDBLite consensus disorder prediction 282 306 - -
Cca03g00388 380 SUPERFAMILY alpha/beta-Hydrolases 11 264 IPR029058 -
Cca03g00388 380 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 1 322 - -
Cca03g00388 380 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00388 Cca-Chr3 6025857 6029572 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00388 K01076 - gmx:100813072 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00388 03 6025857 6029572 Cca03g00388 03 6025857 6029572 ECH