Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00380 ATGGCGGGTGATAGCAATCGCAACGTGAGACTGCTATGCAACCCGAAGCAACTAAACACCAAAGGATCCGACCCGGAAATCCATTTCTGGCTTATCGGATCCCCATTCTTCCCGCCACTCACCGTCGCTTCCTTCCTCCGCCGCGTCCACGCCCTCCCCTCCGATTTCCCCAACGAATCGCACGACCTTCGGACACTCATCCCCAAAGGCTTCGAGGTCATCGGCGCCCTAGCTTCCGGCGACGGAGAAGCCGACGCTCGTGCGCCCGTGGACGCCGCACGTGCGTTGAGGAGCCTTCTCTACGGCGAAGGAACGGAGCGGCCGGTGATCGGAGCAGTTCGCGGTTCGCATTCCGGCGACCTGCGGTTTTTCGTGTCTGAGAGTGGAAATGCGGCGAGCCTCGAAGCTGTTACGTCGGTGATAGAGGAACAGCATCCGGAGAAGTATGTGTGGGAGAACGGTTGCTTGCTTCACTGTGAGCTTCCGATTAAGTTGCCGCTCTATTATGCTCTCAAAAATCCAACTGATGTTGAGAAAGCATATGTACAGGCTACTGAAGCTGTTGTTGCCAAGTTAAGAGATCCTCAGGCTGTGTACATGTTGGAAACGTCTAACAAAACCTCTCAGGATATACCCCCTATCATAATTCGAGGTTTACAATTAGACTTTTACACAGACCTTTCCAAGATCAAGCCTTTGTCTGAGGGTGAAGATGGCTTCAGTGCAAGCTCACTATCATGTTCATACTTTTCCATCAGCAGTAAAGCAGGCTCACCAGTTTTTTCTGCAGAGAATGCAGATACTATCCAAGTTAGTGTTCTCTTTAATAGCTTAGGGTCATCATCAGCTTCTACCGTGCCTGTTGCAGAATACTTTCCAGTCCAGGAAGAAACTAGACTCCTTACTGTGGATATTAAGCTAGATGTACTCTGCTATTCTTCTAGGGAGCTTCCACTGAAATATGCAGTTTCAAGTTTAATCATCCCTGGCTTAGTTGACCAGTTAAATGTAGTGCAGAAGTTGATGTTGCCTAACCTTTTGGCACAACATCCTCGGTTAAAATCTTATCACTTTAGTCCTCCTGGGATTCTGCACCCAATAACTGTTTTCTATGAACTGAGTTTTGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTGCACTCAAGGTTGGGATTACCTTATGACCGTCCCCTTCTAAGAATTTCTAATGCCTTGGATTTTTCAAAATTGAAGAAAAATGATATTGTCTCTTTGCAGAAAGGTTCAACGTTACTCAAAAATGTTCACACTGGGATTCCAAGTAGTGGAGTTACTGGGGGAACTGTTTCCCTTGTTCAAGGTTCCTATGAATACTTTCATTATCTTCAGGATGGTTATAATGATTCGGGATGGGGTTGTGCGTACCGCTCTCTCCAGACTATAATTTCATGGTTCAGACTCCAAAACTATACATCCATAGAAGTTCCTTCTCATAGGGAAATACAGCAGACACTTGTTGAGATTGGTGATAAAGACCCTTCTTTTGTTGGATCACGAGAATGGATCGGTGCCATCGAGTTGAGCTTTGTTTTGGACAAACTTCTAGGTGTTACTTGCAAGGTCATCAATGTTAGATCTGGAGCTGAGCTTCCGGAAAAATGTCGAGAGCTAGCATTGCACTTTGAGACCCAAAGTACACCTGTTATGATTGGTGGTGGTGTACTTGCATATACACTCTTGGGAGTGGATTACAATGAAGCAAGTGGAGATTGTGCATTTTTAATACTAGATCCGCACTATACAGGTACTGAAGATCTGAAGAAAATAGTTAATGGGGGATGGTGTGGTTGGAAAAAGGCCGTTGATAACAAGGGAAGGAATTTCTTCTTGCATGATAAGTTTTATAATCTACTGCTCCCGCAGAGGCCCAACATGGTTTGA 1929 0.4578 MAGDSNRNVRLLCNPKQLNTKGSDPEIHFWLIGSPFFPPLTVASFLRRVHALPSDFPNESHDLRTLIPKGFEVIGALASGDGEADARAPVDAARALRSLLYGEGTERPVIGAVRGSHSGDLRFFVSESGNAASLEAVTSVIEEQHPEKYVWENGCLLHCELPIKLPLYYALKNPTDVEKAYVQATEAVVAKLRDPQAVYMLETSNKTSQDIPPIIIRGLQLDFYTDLSKIKPLSEGEDGFSASSLSCSYFSISSKAGSPVFSAENADTIQVSVLFNSLGSSSASTVPVAEYFPVQEETRLLTVDIKLDVLCYSSRELPLKYAVSSLIIPGLVDQLNVVQKLMLPNLLAQHPRLKSYHFSPPGILHPITVFYELSFGETEMKQVEVRRSLHSRLGLPYDRPLLRISNALDFSKLKKNDIVSLQKGSTLLKNVHTGIPSSGVTGGTVSLVQGSYEYFHYLQDGYNDSGWGCAYRSLQTIISWFRLQNYTSIEVPSHREIQQTLVEIGDKDPSFVGSREWIGAIELSFVLDKLLGVTCKVINVRSGAELPEKCRELALHFETQSTPVMIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGTEDLKKIVNGGWCGWKKAVDNKGRNFFLHDKFYNLLLPQRPNMV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00380 642 PANTHER - 112 641 - -
Cca03g00380 642 Gene3D - 425 642 - -
Cca03g00380 642 ProSiteProfiles Rhodanese domain profile. 604 622 IPR001763 -
Cca03g00380 642 Pfam Peptidase family C78 444 634 IPR012462 -
Cca03g00380 642 SUPERFAMILY Cysteine proteinases 461 599 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00380 K01376 - gmx:100819651 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00380 03 5891878 5901032 Cca03g00380 03 5891878 5901032 ECH