Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00373 ATGGTTAGGGCTCGCGAGAACTGGGAGAAGCTGGTTCGAGCGGCGCTGAAGAGGGAGCAGCAGAGGAATGCAGGCCAAGGCCACACCAGAGTCCCCAGCGGAATCGCCGGCGCGGTTCCGCCGTCCCTCGCTCAAACCACCAACATTGATTTGATTTTGCAGGCCGCCGATGAGATTCAGTCGGAGGACCCTAACGTCGCTAGGATCCTGTGCGAGCAGGCATATAGTATGGCTCAAAATCTTGATCCCAACAGTGATGGTAGGGGAGTTCTACAGTTCAAGACTGGTTTAATGTCTGTAATCAAGCAAAAACTTGCTAAGAAGGATGGGGTACGGATTGATCGCAATCGCGACATTGAAAACCTGTGGAAGTTTTATCAACACTACAAGCAACGTCATAGAGTGGATGACATTCAACGAGAAGAACAGAGATTGCAAGAATCTGGAACTTTTAGCTCCACACTGGGAGAGTTGAAACTTAGATCGTCAGAAATGAAAAAGATAATTGCCACATTACGTGCTTTAGTGGAAGTTCTGGAGGCACTTAGCAAGGATGCTGATCCCAGTGGAGTTGGAGGGCTCATAATGGAGGAGTTGCGAAAAATGAAAAAGTCAAGTGTGACATTTTCTGGAGAGCTGACACCATACAATATTATTCCTTTGGAAGCACCGTCACTAACCAATCCTATCAGAATTTTCCCAGAAGTTAAAGCGGCAATATCTGCAATTAGATATACTGATCAGTTCCCTAGACTTCCTGCTGGATTTAAAGTATCTGGACAAAGGGATGCAGATATGTTTGATCTTTTGGAATTTGTGTTCGGTTTTCAGAAAGATAATGTAAGGAACCAGCGTGAAAATATTGTTTTGATGATAGCAAATAAGCAGTCTCGACTTGGCATACCTGCTGAAACTGATCCAAAAATAGATGAGAAAACAATCAATGACGTCTTCTTGAAGGCGCTAGATAACTATATCAGGTGGTGCAGATACTTGCGAATACGTCTTGCATGGAATAGTTTAGAGGCAATTAACCGAGATAGGAAGCTTTTTTTGGTTTCCCTGTATTTTCTTATATGGGGTGAAGCAGCAAATGTCCGTTTTCTTCCTGAGTGCATTTGCTATCTATTCCACCATATGGCTAAAGAGTTGGATGCTATTTTGGATCGTGGAGAAGCTGAACCTGCAAGCAGCTGTGTAACCGATGATGGTTCTGCAAAATTCCTTGAGAAAATAATTTGTCCTGTATATAAAACGCTAGTGGCTGAAGCCCAACAAAACAACAATGGGAAAGCTGCACATTCAGCATGGAGGAATTATGATGACTTCAACGAATACTTTTGGTCGCCTGCTTGTTTTGAATTAAGCTGGCCAATGAGGATGGAATCACCGTTCTTGAGAATGCCTAAAACTAAAAAGTCAAAAAGGACTGGTAAAAGCAGTTTTGTTGAGCATAGAACGTTTTTTCATTTGTATCGAAGCTTCCATCGTCTTTGGATCTTCTTGGCATTAATGTTTCAGGCTTTGACAATCATTGCTTTCAATCATGGACATATTAACTTGGATACTTTCAAAACCATACTTAGCATTGGGCCGTCATTTGTTATCATGAATTTTGTCAAGAGTTGCTTAGATGTGTTGCTTACTTTCGGGGCTTACACCACTGCAAGGGGCATGGCTGTTTCAAGACTAGTTATAAGATTTTTTTGGGGTGGCTTGACTTCCGTGTTTGTAACATATGTTTACCTGAAGGTTTTGCAAGAGAGAAATAGTCATAACTCTGACAATTCATTATATTTCCGGATATACCTTCTTGTGCTTGGTGTTTATGCTGCTCTACGTCTATTCCTTGCACTGTTGCTCAAATTTCCAGCTTGCCATTCACTTTCGGAAATGTCAGATCAGTCATTCTTTCAGTTTTTCAAGTGGATTTATCAAGAGAGGTACTATGTTGGACGTGGTCTTTATGAGAGGATGGGCGATTACTGCAGGTATGTGGCCTTTTGGTTGGTGGTACTCGCCTGCAAATTCACTTTCGCGTACTTTCTCCAGATTAGACCTCTTGTCAAACCTACCAATATCATTATTGATCTTCCGTCTTTGGAATACTCATGGCATGATTTGATCTCAAAGAATAATAACAATGTCTTGACTGTTGTTAGCTTGTGGGCTCCTGTTGTAGCTATTTATCTCATGGATATTCTCATTTGGTACACTGTCATGTCGGCCATTGTTGGTGGTGTGATTGGTGCACGAGCCCGGCTAGGCGAGATTCGTTCAATTGAAATGGTACATAAACGTTTTGAAAGTTTTCCAGGGGCATTTGTAAAAAGTTTGGTCTCTCCACAAATAAAAAGGATACCCTTCAGTGGACAATCAACCCAGGATTCTCAAGATATGAACAAAGCATATGCTGCCATGTTTGCCCCATTTTGGAACGAGATAATTAAAAGCCTGCGCGAGGAAGACTTTATTAGCAATAGGGAAATGGATCTGCTTTCTATTCCTAGTAATGCAGGAAGTTTGAGATTAGTTCAATGGCCTTTGTTTCTTCTGAGCAGTAAGATACTGCTGGCTATTGATTTGGCTTTGGACTGCAAAGATACTCAGACAGATCTGTGGAACAGGATATGTAGGGATGAATATATGGCCTATGCAGTTAAGGAATGCTATTACAGTGTTGAAAAGATATTATATTCATTAGTTGATCAGGAAGGAAGGCTTTGGGTGGAAAGAATTTTTCGTGAGATCAATAACAGTATAGTGGAGGGTTCTCTTGTTATAACCTTATCCCTTAAGAAGCTTCCAGTTGTTTTGTCAAGACTTACGGCATTGACTGGACTCCTGATACGAAATGATCCTGAACTTGCTAAAGGAGCTGCAAAAGCTGTACATGACCTATATGAAGTTGTTACTCATGAACTTGTATCTTCAGATTTAAGGGAGAATCTTGATACGTGGAACATTTTAGCTAGAGCTAGGGATGAGGGACGCCTTTTTTCTAGGATAGTATGGCCTAATGATCCTGAAATTAAAGAGCTTGTGAAGCGGTTGCATCTTCTTCTTACTGTGAAAGATTCTGCTGCTAATGTTCCAAAAAATCTTGAAGCCAGGAGAAGATTAGAGTTTTTCACAAATTCATTATTTATGGACATGCCTTCAGCAAAGCCTGTTAGTGAAATGTTGCCATTCAGTGTTTTCACCCCATACTATAGTGAAACTGTGCTTTATAGTAGTTCCGAATTGCAAAAAGAGAACGAAGATGGTATATCTATTCTTTTCTATCTTCAAAAGATATTTCCAGATGAATGGGAAAACTTTCTTGAAAGAATTGGTCGAGGAGCTTCCACTGGGGATGCAGAACTTCAAGAAAGTTCTAGTGACTCTTTGGAACTTCGTTTTTGGGCTTCTTATCGAGGGCAGACGCTTGCAAGGACAGTGCGTGGTATGATGTACTATAGAAGGGCTTTAATGCTGCAGAGCTTTCTGGAGAGCAGATCACTGGGAGTGGACAATTTTTCTCAAAACAACTTCATTACAAGTCAAGATTTTGAATCATCTCGTGAATCACGGGCACAGGCAGATTTGAAGTTTACTTATGTTGTATCATGCCAAATTTATGGTCAACAAAAGCAGCGAAAGGCACCGGAAGCTGCTGATATTGCTTTATTGTTACAGAGGAATGAAGCACTGCGAGTTGCTTTCATTCATGTTGATGAAAGTACAACTGATGCAAACACTTCAAGAGTGTTTTATTCAAAGCTTGTCAAAGCCGATATAAATGGAAAAGATCAGGAAATATATTCTATTAAACTTCCTGGAGATCCAAAGCTTGGGGAAGGAAAGCCTGAAAACCAAAACCATGCCATAATTTTCACTCGTGGTGATGCTGTTCAAACTATTGACATGAATCAGGACAATTATCTTGAGGAAGCAATGAAAATGAGAAATCTTTTGGAGGAGTTCCACGCAAATCATGGCCTTCGCCCTCCAAGCATTCTTGGAGTGAGGGAACATGTTTTTACTGGAAGTGTCTCATCCTTGGCTTGGTTCATGTCAAATCAAGAAACTAGCTTTGTAACCTTGGCCCAACGAGTTTTAGCAAATCCTCTCAAAGTCCGAATGCACTATGGACACCCAGATGTATTTGACAGAATATTTCATGTAACTCGAGGAGGCATTAGCAAGGCATCACGTGTTATTAATATTAGTGAAGATATATATGCTGGTTTCAACTCCACATTGCGGCTGGGAAATATCACACATCATGAATACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAGATTGCCCTCTTTGAGGGGAAAGTGGCAGGTGGTAATGGAGAGCAAGTGCTTAGCAGGGATATATACAGGCTTGGACAACTTTTTGATTTCTTCAGAATGCTTTCTTTCTACTTCACAACCGTTGGTTATTATGTCTGCACAATGATGACAGTCCTTACAGTATATATATTCTTATATGGAAGAGCATACCTGGCGTTTTCTGGTCTTGATGAATCTGTCTCAGAGGAGGCAAAATTGGAGGGTAACACAGCACTTGATGCAGCATTGAATGCTCAATTTTTGGTCCAAATTGGCGTTTTTACTGCTGTACCAATGATAATGGGTTTTATACTTGAATTAGGATTGCTGAAGGCTGTTTTCAGTTTCATTACGATGCAACTACAGTTGTGTTCTGTCTTCTTCACATTCTCATTGGGAACTAGAACTCATTATTTTGGGCGTACCATTCTCCACGGGGGTGCAAAATACCGTGCAACTGGTAGAGGCTTTGTAGTCCGCCACATAAAGTTTGCTGAAAACTACAGACTATATTCTAGGAGTCACTTTGTCAAAGCGCTTGAAGTAGCACTACTTCTTATAGTGTATATCGCATATGGGTATGCAGAGGGAGGTGCTGTTACGTATGTTTTGCTAACCTTTAGCAGTTGGTTCCTTGTCATTTCATGGCTTTTCGCACCTTACATTTTCAATCCCTCAGGATTCGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACAAGTTGGCTTCTTTACAAAGGAGGAGTAGGGGTTAAGGGAGATAATAGTTGGGAGTCTTGGTGGGATGAGGAACAGATGCATATCCAAACTTTGAGAGGTCGTATTTTAGAGACAATTTTGAGTGCAAGGTTCTTCTTGTTTCAATATGGTATTGTATATAAGCTGCATCTTACCGGGAAAGATACATCACTTGCGATATATGGATTCTCATGGGTTGTCTTGGTTGGAATTGTGTTGATATTCAAGATCTTTACCTACAGCCCAAAAAAGTCTGCCGATTTTCAGCTAGTGTTGCGATTTTCACAGGGAGTTGCATCTATAGGCCTTGTTGCAGCTGTGTGTCTTGTTGTTGCCTTTACTCAACTTTCAATACCTGACCTTTTCGCAAGCATCCTTGCATTTATCCCTACTGGTTGGGGAATATTATCCTTGGCAATTGCATGGAGGAAGATAGTTTGGAGTCTGGGCTTGTGGGATTCTGTCCGTGAGTTCGCTAGGATGTATGATGCAGGAATGGGCATGATCATTTTTGCACCAATAGCGTTTTTGTCATGGTTTCCATTCATTTCCACTTTCCAGTCTCGCCTTCTCTTCAATCAAGCCTTCAGCCGTGGTCTTGAAATCTCTATCATCCTTGCTGGAAATAAAGCTAATGTGGAGGCTTAA 5721 0.4109 MVRARENWEKLVRAALKREQQRNAGQGHTRVPSGIAGAVPPSLAQTTNIDLILQAADEIQSEDPNVARILCEQAYSMAQNLDPNSDGRGVLQFKTGLMSVIKQKLAKKDGVRIDRNRDIENLWKFYQHYKQRHRVDDIQREEQRLQESGTFSSTLGELKLRSSEMKKIIATLRALVEVLEALSKDADPSGVGGLIMEELRKMKKSSVTFSGELTPYNIIPLEAPSLTNPIRIFPEVKAAISAIRYTDQFPRLPAGFKVSGQRDADMFDLLEFVFGFQKDNVRNQRENIVLMIANKQSRLGIPAETDPKIDEKTINDVFLKALDNYIRWCRYLRIRLAWNSLEAINRDRKLFLVSLYFLIWGEAANVRFLPECICYLFHHMAKELDAILDRGEAEPASSCVTDDGSAKFLEKIICPVYKTLVAEAQQNNNGKAAHSAWRNYDDFNEYFWSPACFELSWPMRMESPFLRMPKTKKSKRTGKSSFVEHRTFFHLYRSFHRLWIFLALMFQALTIIAFNHGHINLDTFKTILSIGPSFVIMNFVKSCLDVLLTFGAYTTARGMAVSRLVIRFFWGGLTSVFVTYVYLKVLQERNSHNSDNSLYFRIYLLVLGVYAALRLFLALLLKFPACHSLSEMSDQSFFQFFKWIYQERYYVGRGLYERMGDYCRYVAFWLVVLACKFTFAYFLQIRPLVKPTNIIIDLPSLEYSWHDLISKNNNNVLTVVSLWAPVVAIYLMDILIWYTVMSAIVGGVIGARARLGEIRSIEMVHKRFESFPGAFVKSLVSPQIKRIPFSGQSTQDSQDMNKAYAAMFAPFWNEIIKSLREEDFISNREMDLLSIPSNAGSLRLVQWPLFLLSSKILLAIDLALDCKDTQTDLWNRICRDEYMAYAVKECYYSVEKILYSLVDQEGRLWVERIFREINNSIVEGSLVITLSLKKLPVVLSRLTALTGLLIRNDPELAKGAAKAVHDLYEVVTHELVSSDLRENLDTWNILARARDEGRLFSRIVWPNDPEIKELVKRLHLLLTVKDSAANVPKNLEARRRLEFFTNSLFMDMPSAKPVSEMLPFSVFTPYYSETVLYSSSELQKENEDGISILFYLQKIFPDEWENFLERIGRGASTGDAELQESSSDSLELRFWASYRGQTLARTVRGMMYYRRALMLQSFLESRSLGVDNFSQNNFITSQDFESSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEALRVAFIHVDESTTDANTSRVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEFHANHGLRPPSILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLANPLKVRMHYGHPDVFDRIFHVTRGGISKASRVINISEDIYAGFNSTLRLGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYFTTVGYYVCTMMTVLTVYIFLYGRAYLAFSGLDESVSEEAKLEGNTALDAALNAQFLVQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLLTFSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGDNSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGIVYKLHLTGKDTSLAIYGFSWVVLVGIVLIFKIFTYSPKKSADFQLVLRFSQGVASIGLVAAVCLVVAFTQLSIPDLFASILAFIPTGWGILSLAIAWRKIVWSLGLWDSVREFARMYDAGMGMIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNKANVEA 1906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00373 1906 PANTHER BNAC03G35120D PROTEIN 1 1904 - -
Cca03g00373 1906 SMART FKS1_dom1_2 347 460 IPR026899 -
Cca03g00373 1906 Gene3D - 35 188 IPR023175 -
Cca03g00373 1906 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1904 - -
Cca03g00373 1906 Pfam 1,3-beta-glucan synthase component 1031 1802 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cca03g00373 1906 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00373 Cca-Chr3 5758223 5818481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00373 1 1906 Glycosyltransferase AT2G36850 77.574 0.0 3118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00373 K11000 - gmx:100777959 3603.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00373 03 5758223 5818481 Cca03g00373 03 5758223 5818481 ECH