Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00364 atggggaagaagacgaagaagCCCGGCAAAGGCAAAGAGAAAACAGAGAGGAAAACCGCGAGAGCCGAGGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTTTCACCCGAAGACGACATCGATGCCATTTTGTTGAGCATTCAAAAAGAGGAGGCCAAAAAGAAGGAAGTCCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGTTCCAACTGCACGCTCACTGTAAATCCTTTGAAAGAGACCGAGTTGATTCTCTACGGCGGCGAATTCTACAACGGAAACAAGACCTTCGTGTACGGCGATTTGTACCGCTATGATGTGGAGAAGCTGGAATGGAAATTGGTTTCGAGTCCTAACAGTCCTCCTCCTCGCAGTGCTCATCAAGCGGTTGCGTGGAAGAATTTTGTTTATATTTTTGGTGGGGAGTTCACATCTCCGAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACGAATCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCCAGTCCACGGTCAGGGCATCGAATGGTATTGTACAAGCACAAGATTATTCTTTTCGGTGGCTTCTATGACACCCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAGATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGGACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGATATTTTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCCGATAAGAACAACTCTGAGAAAGGATTTGTTCATTCAGATATGTGGTCCCTTGATCCTAAGACATGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGACCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTGTGCTATTTGGTGGTGTTGTGGATATAGAAGTTCAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAGCTTTATGGCTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACAAAAGATAAGTTAAAAAAAATTGAACAAAATTGTGCTGATGGTGTTGACAAGATAAATCCAGCATGTACCGCAAGAGAAGACGTTGAGGAGGAAGAGGATGAAGAAAGCAACATTGATGATATATCCAAGAATATAGCATCAAACATGTCTGTTGTTGACAGTGAAACACATAACAAATCCGAAGAAAAGCCCAAGGAGTGTGTTGCTAAATCGGAGATTCAAAGTTCTTTGCCAGAGGTAGTGAAGCCCTGTGGACGTATTAATGCCTGCATGGCCGTTGGAAGAGATACATTATATATATATGGCGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGCATCAGAATCTGAATGGGTGgaagcttcagatgatgatgaagaaaatgaagatgatgatgaagatgaatcagatggcgatagctcaactgatgaggatgaagatgatgaagaagaggaggaggaagaGGCTCAGAATGCATCAGTTCAGGTGGGAGACGCTGTTGCTCTAATCAAAGGAGGAGGAAAGAATCTGCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCTAGTCTTGGCTTGTCCGATTCACAGAGAACACCATTGGCTGGAGAATCCTTGAGAGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTTGCTGAAGCTCGGTACAGGGAGCTAAAACCTATTCTTGACGAGCTGTCTCTATTAGAAGCTGAACAAAAAGCTGAGGAGGCCGAAGGGCCAGAAACTAGTGCAAAGAAAAGAGGCAAGAAGAAAACTAGAAATTGA 1983 0.407 MGKKTKKPGKGKEKTERKTARAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCTLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNFVYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTGRSGFQLFVYQDDIFLYGGYSKEVSSDKNNSEKGFVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRAVLFGGVVDIEVQGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKIEQNCADGVDKINPACTAREDVEEEEDEESNIDDISKNIASNMSVVDSETHNKSEEKPKECVAKSEIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASDDDEENEDDDEDESDGDSSTDEDEDDEEEEEEEAQNASVQVGDAVALIKGGGKNLRRKERRSRIEQIRASLGLSDSQRTPLAGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELSLLEAEQKAEEAEGPETSAKKRGKKKTRN 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00364 660 MobiDBLite consensus disorder prediction 1 35 - -
Cca03g00364 660 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 653 - -
Cca03g00364 660 SUPERFAMILY Kelch motif 82 484 IPR015915 GO:0005515
Cca03g00364 660 MobiDBLite consensus disorder prediction 493 533 - -
Cca03g00364 660 MobiDBLite consensus disorder prediction 12 35 - -
Cca03g00364 660 Coils Coil 12 32 - -
Cca03g00364 660 Gene3D - 42 367 IPR015915 GO:0005515
Cca03g00364 660 MobiDBLite consensus disorder prediction 490 540 - -
Cca03g00364 660 MobiDBLite consensus disorder prediction 638 660 - -
Cca03g00364 660 Pfam Galactose oxidase, central domain 445 487 - -
Cca03g00364 660 Pfam Galactose oxidase, central domain 68 122 - -
Cca03g00364 660 Pfam Domain of unknown function (DUF4110) 569 654 IPR025183 -
Cca03g00364 660 Pfam Galactose oxidase, central domain 246 305 - -
Cca03g00364 660 Pfam Galactose oxidase, central domain 135 187 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00364 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 28.571 5.30e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00364 - - gmx:100818228 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00364 03 5597145 5611104 Cca03g00364 03 5597145 5611104 ECH