Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00358 ATGCAACTCCTGCAAACCTCTTATCTCTTCACTTTCCCTAAACCCCTAAACCCTACcctcccccttctccaccaccgtcctccgccactcctccaccgtcccctcctcctccatccccgcgccaaatccaccacctccGACGAGTTCCCCGTCGACGATGCCTTCCTCGAGAGCTTCGGGCCCAAAGACAAAGAAACCGAGGACGAGGCCCGCCGCCGCAACTGGATCGAGCGCGGGTGGGCCCCGTGGGAGGAAATCCTCACTCCGGAGGCCGATTTCGCGCGCAAGAGCCTCAACGAAGGCGAAGAGGTTCCGCTTCGCTCTCCCGAAGCCATCGAAGCCTTCAAAATGCTGAACCCTAACTACCGCAAGAAGAAGCGCGAGGAGATGGGGCTCACGGAGGAGGAGTACTCCGCCAAGCAGTTCGAGATCAAGGGCGAGATTCCCGAGCCGCTCGTCACCTCTTGGTCGGGGCCGCTCGTGGTCCGCCTCGTGCCGCCGCGCGACTGGCCGCCGCGTGGGTGGCGCGTGGACCGGAAGGAGCTGGCGTTCATCCGCGAGGCGCACaggatgcaggcgaggagggtgcggttggaggaggtggagagtggagtgaggactgagactgatgacgtgTGTTTGGATAGGTATAAGGTGTTTCTGAAGCAGTATAAGGAGTGGGTGGAGGCTAATAAGGATAGATTGGAGGAAGAGTCTTATAAGCAAGACCAAGATTATTACCCTGGTAGAAGGAAAAGAGGGAAGGACTACAAGGAGGGCATGCATTTTTATCTTGTTCAGTTTTACTATTTGATGTTTTTATTTTTATGGAGTGTTCTTTGGGGAGATTCATCTACTGTGTTGTGTTCTAGGTGGGTTCCTATAAAGAACAATGATTGGTATTGGATTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGTTTTCCTATTGAACTTCGTTTTCTTGAGCCAAATATAGATCATCTGATCTTTAACAGATTTGACTTCCCACCAATATTTCGTCGTGATGAAGATACTAATGATGATGAATTACGGCGTGACTGTGGACGGCCTCCTGTTCCTAGAAAAGATCCAGAAGACAAACCAGAGGAAGAACCTCTATTATCAAATCATCCATATGTTGAAAAGTTGTGGCAAATTAATGTAGCTGAGCAAATGATTTTGGATGATATGGCGATTAATCCTGATAAATATAAAGGCAAAACGCTGTCAGACTTGGCTGATGAAGAAGATTTTGATGAACAAAATGCTGTTCAGTATACAAAAGTTCCTTATAAGAATACATTAGTACCACAAACTACTCTGGTGAGTACTATTGTGAAATTGCATTCATATGGTTGCTTACCTATTTTGTTTACCTTTTTTTTTTTAACATTTTGGCAGAAAACAAGTGTCAAAGAGCTTGACTTGGAGGCTGCACTTGCTGAGCGTGAGCTCCATGTTAAACTAAGGAAGGAAGCAATGGACAGAGGTGAGAAATACAAAATTACTCACCTGAGGCGCAATATTGAGATGGACGAGTATGACTACATGCATTGGCGTAGATCATTTGAGGAAAGAGAAGCATTGATTAGAGACATCAGTTGTCGCAAAGTTCTTGGTCTGCCATTGGAAGAGCCAGGAAGGTATATGGATGCTAGTTATTTTGGTAATGATGAATATGATCCCACAAGTCCTCTGTATCGTTATGACTACTGGGGAGAACCCAATAATTCAGAAAAGAGCGTTCTAGAGCGGATGACAGATATCCATAACAAAAAAATTGTCGGTAAGGGCAATGTTTGGTATGAAATGTCTTACGAAGATTGCATCAAGCAACAGATGGAAAGAGAAGCCCGGTCtgaagaacaagaccaaattaacagtgaagatgatgaagatgacaaagatgacgatgacgatgatgatTTTGACTTCAGTATTCTGAACAGTCTCGGTAGTAATTTCTCAGATCAACCTCATGTTAATGGGACCGAGTCTTCTACAATATCAGGTGAGGGCATGTTTGAGGATTGA 2076 0.4051 MQLLQTSYLFTFPKPLNPTLPLLHHRPPPLLHRPLLLHPRAKSTTSDEFPVDDAFLESFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLRSPEAIEAFKMLNPNYRKKKREEMGLTEEEYSAKQFEIKGEIPEPLVTSWSGPLVVRLVPPRDWPPRGWRVDRKELAFIREAHRMQARRVRLEEVESGVRTETDDVCLDRYKVFLKQYKEWVEANKDRLEEESYKQDQDYYPGRRKRGKDYKEGMHFYLVQFYYLMFLFLWSVLWGDSSTVLCSRWVPIKNNDWYWIRHHIKVGMHVIVEITAKRDPYRFRFPIELRFLEPNIDHLIFNRFDFPPIFRRDEDTNDDELRRDCGRPPVPRKDPEDKPEEEPLLSNHPYVEKLWQINVAEQMILDDMAINPDKYKGKTLSDLADEEDFDEQNAVQYTKVPYKNTLVPQTTLVSTIVKLHSYGCLPILFTFFFLTFWQKTSVKELDLEAALAERELHVKLRKEAMDRGEKYKITHLRRNIEMDEYDYMHWRRSFEEREALIRDISCRKVLGLPLEEPGRYMDASYFGNDEYDPTSPLYRYDYWGEPNNSEKSVLERMTDIHNKKIVGKGNVWYEMSYEDCIKQQMEREARSEEQDQINSEDDEDDKDDDDDDDFDFSILNSLGSNFSDQPHVNGTESSTISGEGMFED 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00358 691 MobiDBLite consensus disorder prediction 627 691 - -
Cca03g00358 691 Coils Coil 625 645 - -
Cca03g00358 691 MobiDBLite consensus disorder prediction 638 659 - -
Cca03g00358 691 MobiDBLite consensus disorder prediction 358 387 - -
Cca03g00358 691 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 40 677 IPR044967 GO:0000427|GO:0003723
Cca03g00358 691 MobiDBLite consensus disorder prediction 661 685 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00358 - - gmx:100783002 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00358 03 5477911 5486479 Cca03g00358 03 5477911 5486479 ECH