Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00353 ATGGCGAAGCAAGAGACTCACGCCGTCGTTTCCGATCTCATCGACTTCCTCAACGCTTCTCCCACGGCTTTCCACGCCGTCGACGAGGCCAAGAAGCGTTTGCAAAGCGCGGGTTTCCACCAACTCTCGGAGAAGGAGCTCTGGGAACTGCAACCTGGCAACAAGTACTTCTTCACCAGAAACCACTCCACCATCGTCGCCTTCGCCGTCGGCAAAAGGTACGTCGCTGGAAACGGATTCTACATAATCGGCGCTCACACCGATAGTCCTTGCCTCAAACTCAAGCCTGTCTCCAAGGCAAGTGGAGGAGAAAAAGATTCTGTGGGATTCAGTGAAAATGACTATGGCAGTTCGAAGCACAACAAATCCGGAAGAACTACAGATAGTCACCCATGA 396 0.5253 MAKQETHAVVSDLIDFLNASPTAFHAVDEAKKRLQSAGFHQLSEKELWELQPGNKYFFTRNHSTIVAFAVGKRYVAGNGFYIIGAHTDSPCLKLKPVSKASGGEKDSVGFSENDYGSSKHNKSGRTTDSHP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00353 131 MobiDBLite consensus disorder prediction 96 131 - -
Cca03g00353 131 PANTHER ASPARTYL AMINOPEPTIDASE 2 110 - -
Cca03g00353 131 SUPERFAMILY Zn-dependent exopeptidases 4 93 - -
Cca03g00353 131 PANTHER ASPARTYL AMINOPEPTIDASE 2 110 IPR001948 GO:0004177|GO:0006508|GO:0008270
Cca03g00353 131 Pfam Aminopeptidase I zinc metalloprotease (M18) 16 117 IPR001948 GO:0004177|GO:0006508|GO:0008270
Cca03g00353 131 Gene3D Zn peptidases 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00353 Cca-Chr3 5433711 5436142 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00353 K01267 - ccaj:114915860 204.527