Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00332 ATGAAAATGAAAGGGGCTATTGGAAATTGGTTCAGTATGATTTTGCTGATTCTGTGGTTCACCAATTTGAGCATCGTTTTTGGTCATAATCACATCAACTTTGGAGAGCAGCCACTGGCCAAGATAGCCATCCACAAGACTGTTTTGGCTCTCCACAGTTCAGCTTCCATTACAGCAATCCCCTATGTGCTCGGCATTAAGGGTGATGATACAGAATGGGTAACTGTTGAGCTAGAGTCCCCACACCCATCTGTAGATGACTGGGTCGGAGTTTTCTCTCCAGCAAACTTCAATTCATCAACATGTCCATACACTGGCGGCGTTGGCTGGGTAGAGGAACCATACATATGCTCAGCCCCAATAAAATACAAGTATGCCAACCACTCTAATCCAAATTATGCAAAGACCGGGAAAACTACTTTGAAGTTCCAGTTGATTAATCAACGTGCAGATTTCTCCTTTGCCCTATTTTCAGGAGGATTGTCAGATCCTAGACTTGTGGCAGTTTCCAATTCCATATCATTTGCAAACCCTAAAGCACCTGTGTATCCGCGCCTTGCTTTGGGAAAGTCTTGGGATGAAATGACAGTTACATGGACAAGTGGGTATGACATAGATGAAGCTGTGCCTTTTGTTGAATGGGGTACTAAGGGAGGAAAGCAAACACGATCTCCTGCTGGAACATTGACATTTAATCGTAACAGCATGTGTGGTGAACCTGCACGAACTGTTGGCTGGCGTGACCCTGGTTTTATACACACAAGTTTCCTAAAAGAACTTTGGCCAAATTTTAGGTACACTTACAGATTGGGGCATATGTTGCTTTCTGATGGTTCTTACGTATGGAGTAAGACTTATTCGTTTAAGGCATCCCCTTATCCTGGACAGAACTCTTTGCAACGTGTTGTCATATTTGGTGACATGGGAAAGGCTGAACGTGATGGTTCAAATGAATATGCTGATTATCAACCTGGTTCACTCAACACCACTGACCAACTCATCAAGGATTTGGACAACTATGACATTGTTTTCCACATAGGTGATATGCCTTATGCAAATGGATACGTCTCACAGTGGGACCAGTTCACAGCTCAAGTGCAAAAAATTTCGTCAACTGTACCATACATGATTGCAAGTGGAAATCATGAACGTGATTGGCCAAACACTGGATCTTTTTATGATACTCCAGATTCAGGTGGAGAATGTGGAGTTCCAGCAGAAACCATGTATTATTTTCCTGCTGCTGAGAATAGAGCCAAATTCTGGTATAAAGCAGATTATGGCCTGTTTCGTTTCTGCATAGCAGATAGTGAGCATGACTGGAGAGAAGGATCAGAACAGTACAAATTCATTGAGCATTGTCTTGCAACAGTAGATAGAAAGCATCAACCATGGCTAATCTTTTCAGCTCATCGCCCCCTAGGGTACTCCTCTAATCTTTGGTATGGCATGGAGGGCTCGTTTGAAGAGCCTATGGGAAGAGAAAGTCTGCAGAAGCTTTGGCAAAAGTACAAAGTAGACATTGCATTTTATGGTCACGTCCATAACTATGAAAGAATATGTCCCATTTATCAGAATCAATGTGTGAATTCAGAAAAGCATCATTACTCAGGCACTGTGAATGGAACAATCCATATTGTTGTTGGTGGAGGGGGAAGTCACTTGTCAGACTTCACCTCAGCACCCCCCATTTGGAGTCTATACAGAGACCGTGATTATGGGTTCGGCAAACTCACTGCATTCAATCATTCATATCTCTTGTTTGAGTACAAGAAAAGTAGTGATGGAAATGTCTATGACTCCTTCACCATTTCAAGAGACTACAGAGATGTTTTGGCCTGTGTGCACGATGGTTGTGAGAAAACTACTTTAGCAACCTGA 1881 0.4269 MKMKGAIGNWFSMILLILWFTNLSIVFGHNHINFGEQPLAKIAIHKTVLALHSSASITAIPYVLGIKGDDTEWVTVELESPHPSVDDWVGVFSPANFNSSTCPYTGGVGWVEEPYICSAPIKYKYANHSNPNYAKTGKTTLKFQLINQRADFSFALFSGGLSDPRLVAVSNSISFANPKAPVYPRLALGKSWDEMTVTWTSGYDIDEAVPFVEWGTKGGKQTRSPAGTLTFNRNSMCGEPARTVGWRDPGFIHTSFLKELWPNFRYTYRLGHMLLSDGSYVWSKTYSFKASPYPGQNSLQRVVIFGDMGKAERDGSNEYADYQPGSLNTTDQLIKDLDNYDIVFHIGDMPYANGYVSQWDQFTAQVQKISSTVPYMIASGNHERDWPNTGSFYDTPDSGGECGVPAETMYYFPAAENRAKFWYKADYGLFRFCIADSEHDWREGSEQYKFIEHCLATVDRKHQPWLIFSAHRPLGYSSNLWYGMEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERICPIYQNQCVNSEKHHYSGTVNGTIHIVVGGGGSHLSDFTSAPPIWSLYRDRDYGFGKLTAFNHSYLLFEYKKSSDGNVYDSFTISRDYRDVLACVHDGCEKTTLAT 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00332 626 CDD MPP_PAPs 300 606 IPR041792 -
Cca03g00332 626 Pfam Iron/zinc purple acid phosphatase-like protein C 542 601 IPR025733 -
Cca03g00332 626 Pfam Fn3-like domain from Purple Acid Phosphatase 57 177 IPR040974 -
Cca03g00332 626 Pfam Purple acid Phosphatase, N-terminal domain 185 289 IPR015914 GO:0003993|GO:0046872
Cca03g00332 626 PANTHER PURPLE ACID PHOSPHATASE 13 625 - -
Cca03g00332 626 PANTHER PURPLE ACID PHOSPHATASE-RELATED 13 625 - -
Cca03g00332 626 Gene3D - 295 610 IPR029052 -
Cca03g00332 626 Pfam Calcineurin-like phosphoesterase 301 517 IPR004843 GO:0016787
Cca03g00332 626 Gene3D - 180 294 - -
Cca03g00332 626 SUPERFAMILY Purple acid phosphatase, N-terminal domain 160 292 IPR008963 GO:0003993|GO:0046872
Cca03g00332 626 SUPERFAMILY Metallo-dependent phosphatases 301 617 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00332 Cca-Chr3 5200459 5206928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00332 48 604 Miscellaneous Gene Families AT1G13900 29.605 1.78e-59 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00332 K22390 - gmx:100775672 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00332 03 5200459 5206928 Cca03g00332 03 5200459 5206928 ECH