Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00318 ATGGAAGAACAATCGGTGAACGGCATGATGTCGTCGAGGTCCAAAACGACGCAAGAGTTAGCGATGGAAGGGCAGAAGTACTTGGAAGAAACCATAGAGTACGCTTTCCAGATCCTCTCTTCCATGAACGACGAGCTCTGCAACCCCGTTTTGTGGTCCACTTCTCCCTCCGCCACCTCCCCCAACGCCCCCTCCTCCAACGGCGACGCCGCTTCCGATAACTCCAACCACCACGCCGACAGCGCCGCCGCCGCTGCCGGCGCCCTCGAAGAGGCTCGATTCCGGTATAAGAACGCTGTCGCCGCGCTCCGGACCATTCTCACTGCCATTCCTAACTCCCAGAAGGTGAAAACATTTGACGCTGGTTCTGCTGCTAGCCCTACTGATGAAGATGAAATTGAGAAGTTGGAGGAGCGAGCCACTTCTCTAAGAAGGGAGCTTGCCAACAAGAACTTGCACCTGAAGACACTCATAGATCAACTGCGTGATCTTATCACTGATATATCAACATGGCAAAGTCCTTTTTCAACCTGA 534 0.5356 MEEQSVNGMMSSRSKTTQELAMEGQKYLEETIEYAFQILSSMNDELCNPVLWSTSPSATSPNAPSSNGDAASDNSNHHADSAAAAAGALEEARFRYKNAVAALRTILTAIPNSQKVKTFDAGSAASPTDEDEIEKLEERATSLRRELANKNLHLKTLIDQLRDLITDISTWQSPFST 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00318 177 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 10 176 IPR034568 GO:0016592
Cca03g00318 177 Coils Coil 126 153 - -
Cca03g00318 177 MobiDBLite consensus disorder prediction 56 79 - -
Cca03g00318 177 MobiDBLite consensus disorder prediction 56 84 - -
Cca03g00318 177 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 10 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00318 - - ccaj:109797165 286.189