Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00317 ATGGGAGGTGGCAAACCCAGATCATCCATTCTCATTCTCCTTCTCTGTGTCTTCCTTTGTGGTGTTCTCGCAACGGCACAGCAACAGCAACCTATAAAAACGGTTGTCGTTTTGGTCATGGAGAACCGTTCCTTTGATCACATGCTGGGGTGGATGAAGGAGAGCGTCAACAAATTAATCAATGGTGTCACAGGAGATGAATGCAATCCGGTTTCCACCAAAACTCCGAGGCAAGATTCAATTTGTTTCACCGATGATGCTGAGTTCGTGGATCCGGATCCGGGTCATTCGTTTGAGGATGTTTTGCAACAGGTATTCGGTTCTGGTTCCATCCCTTCCATGAATGGATTCGTGGAACAAGCATTGTCCATGTCTCAGAACCTCTCTGAGACCGTCATGAAAGGGTTTAAACCTGACTCTGTGCCTGTTTACGCTGCTTTGGTTAAGGAATTCGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCGGGCCCAACACAGCCCAATAGACTTTTTGTGTACTCAGCGACCTCGCACGGTTCAACGAGTCATGTCAAGAGGCAGTTAGCAAAAGGGTATCCTCAAAAAACTATCTTTGATTCTCTGCATGAGAATGGCCTGGACTTTGGGATTTACTTTCAAAACATACCCACAACTCTGTTCTATAGGAACCTTAGGAAGTTGAAGTATGTGTTCAAGTTCCATCAGTATGATTTGAAGTTCAAGAGAGATGCTAGGAATGGGAAACTTCCACCCTTTAGTGTGATTGAGCCTAGGTACTTTGACTTGAAGGGCTTGCCCGCGAATGATGACCATCCATCTCATGATGTTGCACATGGCCAAATGCTGGTTAAGGAGGTTTATGAGGCTCTAAGAGCAAGCCCTCAGTGGAATGAGACACTCTTGGTCATTACATATGATGAACATGGTGGGTTTTTTGATCATGTCAAGACTCCTTTTGTTAACATTCCTAATCCAGATGGGAACACCGGACCTGCTCCCTATTTCTTCAAGTTTGATAGGTTAGGGGTTAGGGTGCCAACTATTATGGTCTCTCCTTGGATCAAGAAAGGGACTGTGATAAGTGGAGCCAAAGGACCTGCTGAAAACTCAGAATTTGAGCACTCTTCTATTCCTGCCACTATAAAGAAGATGTTCAACCTTTCCTCCAACTTTTTGACTCATAGAGACGCATGGGCTGGGACGTTTGAGCATGTTGTTGGGGAGTTAAGTTCACCCAGAACAGATTGCCCAGTGACTTTGCCGGACGTCACTCCTCTAAGGATCACTGAAGCAAAAGAAAATGCAGGCCTATCTGCGTTTCAGAGTGAGGTAGTTCAATTGGCAGCTGTTCTAAATGGGGACCATTTCTTGAGCAGTTTCCCCGATGAAATGAGCAAGAAGATGAGTGTGAAGGAAGCTCATGAGTACGTTCGAGGGGCTGTTTCAAGGTTCATAAGAGCTAGCAAAGAGGCCATCAAGTTAGGGGCTGATGAATCTGCTATTGTGGATATGAGATCCTCTCTCACTACTAGATCTTCAATTCATAATTAA 1551 0.4487 MGGGKPRSSILILLLCVFLCGVLATAQQQQPIKTVVVLVMENRSFDHMLGWMKESVNKLINGVTGDECNPVSTKTPRQDSICFTDDAEFVDPDPGHSFEDVLQQVFGSGSIPSMNGFVEQALSMSQNLSETVMKGFKPDSVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAKGYPQKTIFDSLHENGLDFGIYFQNIPTTLFYRNLRKLKYVFKFHQYDLKFKRDARNGKLPPFSVIEPRYFDLKGLPANDDHPSHDVAHGQMLVKEVYEALRASPQWNETLLVITYDEHGGFFDHVKTPFVNIPNPDGNTGPAPYFFKFDRLGVRVPTIMVSPWIKKGTVISGAKGPAENSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEHVVGELSSPRTDCPVTLPDVTPLRITEAKENAGLSAFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVRGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSIHN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00317 516 PANTHER - 9 516 - -
Cca03g00317 516 SUPERFAMILY Alkaline phosphatase-like 148 386 IPR017850 -
Cca03g00317 516 Pfam Phosphoesterase family 32 387 IPR007312 GO:0016788
Cca03g00317 516 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 9 516 IPR007312 GO:0016788
Cca03g00317 516 Gene3D Alkaline Phosphatase, subunit A 260 435 IPR017850 -
Cca03g00317 516 Gene3D Alkaline Phosphatase, subunit A 23 194 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00317 Cca-Chr3 5015014 5018029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00317 9 511 Acyl Lipid Metabolism Gene Families AT3G48610 80.473 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00317 K01114 - gmx:100786332 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00317 03 5015014 5018029 Cca03g00317 03 5015014 5018029 ECH