Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00305 ATGACACGTTTAAGGCAGAACCCGATACTTGCCCCCTCTCTTCACACGTGGCACCCCTGTCCCCCTCTTCACACTTCACAAACATTTTATAAACCTCACTCTAACGTGCTTCTCTCTCGTAGCTCTCAAACGTTGTTTCACTTCACGACTGGTTCATTTTCTTTTCACCTCATAATTCGTTGTTTGTTAATAGAAGATAGATTCAGTAATTACACGTACAAAAAGTATACAAATAATACAGACACATATATGGCCATGGGCAAGTTGTGGACCTTGATCATCCAGCTTCATACTATTGCCGGGCCGGTTTTGATGTTGTTGTACCCTTTGTATGCATCGGTGGTGGCAATAGAGAGCCAATCCAAGTTGGACGACGAGCAATGGTTAGCTTATTGGATCATCTATTCGTTCCTCACCCTTGCGGAATTGGTTCTTCAACCCATCTTACAATGGATACCAATTTGGTACGATGTGAAGCTATTAACGGTGGCATGGTTGGTGTTGCCACAGTTCGAAGGTGCAGCGTATTTATATGAAAGGTTCGTGAGAGAGCACATAAGGAAATACATAACGGAGAGGGAGcaccaccaccaccaccaggtcaaccaccagcaacaAAGCAAAAAATCTCCCAACGAGGGCAAGGCTAAGAAGAAGTTCGTCGAGTTCGTGACACCCAAGAAAGGGGATCAGGAGGCGTATTGA 705 0.4199 MTRLRQNPILAPSLHTWHPCPPLHTSQTFYKPHSNVLLSRSSQTLFHFTTGSFSFHLIIRCLLIEDRFSNYTYKKYTNNTDTYMAMGKLWTLIIQLHTIAGPVLMLLYPLYASVVAIESQSKLDDEQWLAYWIIYSFLTLAELVLQPILQWIPIWYDVKLLTVAWLVLPQFEGAAYLYERFVREHIRKYITEREHHHHHQVNHQQQSKKSPNEGKAKKKFVEFVTPKKGDQEAY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00305 234 MobiDBLite consensus disorder prediction 197 234 - -
Cca03g00305 234 MobiDBLite consensus disorder prediction 210 234 - -
Cca03g00305 234 PANTHER HVA22-LIKE PROTEINS 86 234 IPR004345 -
Cca03g00305 234 PANTHER HVA22-LIKE PROTEIN 86 234 - -
Cca03g00305 234 Pfam TB2/DP1, HVA22 family 109 184 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00305 Cca-Chr3 4645305 4647341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00305 K17279 - gmx:100813655 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00305 03 4645305 4647341 Cca03g00305 03 4645305 4647341 ECH