Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00299 ATGGAACGGAATTCGGTTCGCCGAATCGCCGTGCTCCTAACCGCCTCCTCCTTCTTCGCCCTCGGGCTCCTTGCCGTTTTCACAGGTTTCGGTGGTGGAGCCGTGCTGTCTGTGTCGCTAGAAGGAACCAACACGCTCCCTGGTTTGCATCGCAAGCTTCTTGATCATGGTTCTGCAAGGGTGGAACCGAACCGAATATGGGGTGATAAATGCAGCAAGTCTGATATTGTGATCAGCCAAGGCCCCACGGCCCCACTCCCGAGTGGTATTCCCACGTACACAGTTGAGATCATGAATATGTGTGTGAGTGGATGCGACATCTCTGGCATTCACCTCAGATGCGGCTGGTTCAGTTCTGCACGCCTCATCAACCCCAAGGTCTTCAAGCGCCTCCGTTACAACGATTGCCTCGTCAATGATGGCAAGCCCTTGATCAATGGTGCCACCATTTCCTTTCAGTATGCCAACACATTCCTATATCCTCTCTCCGTTTCCTCTGTCGCCTGTGTCTGA 513 0.5341 MERNSVRRIAVLLTASSFFALGLLAVFTGFGGGAVLSVSLEGTNTLPGLHRKLLDHGSARVEPNRIWGDKCSKSDIVISQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSARLINPKVFKRLRYNDCLVNDGKPLINGATISFQYANTFLYPLSVSSVACV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00299 170 PANTHER PROTEIN TAPETUM DETERMINANT 1 9 170 - -
Cca03g00299 170 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 9 170 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00299 Cca-Chr3 4563296 4566454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00299 - - gmx:100792919 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00299 03 4563296 4566454 Cca03g00299 03 4563296 4566454 ECH